Hi again, I'm afraid I've lost some configuration to get my own UCSC browser listed in the "display at" for BAM, bed, bigwig files... Can anybody post a check-list to configure this :-) ? I believe I have all pieces in their place but evidently something is wrong: this def is into ini files ucsc_display_sites = main,campus and this is in tool-data/shared/ucsc/ucsc_build_sites.txt campus http://genome.ifom-ieo-campus.it/cgi-bin/hgTracks? hg19,hg18,hg17,mm9,mm8,rn4,danRer6,danRer5,ci2,ce6,ce4,cb3,dm3,sacCer2,sacCer1 thanks! d /* Davide Cittaro Cogentech - Consortium for Genomic Technologies via adamello, 16 20139 Milano Italy tel.: +39(02)574303007 e-mail: davide.cittaro@ifom-ieo-campus.it */
Hello, On Aug 25, 2010, at 7:43 AM, Davide Cittaro wrote:
campus http://genome.ifom-ieo-campus.it/cgi-bin/hgTracks? hg19,hg18,hg17,mm9,mm8,rn4,danRer6,danRer5,ci2,ce6,ce4,cb3,dm3,sacCer2,sacCer1
If this definition is space separated (and not tab separated), the site won't be recognized in display_as. Fixed. d /* Davide Cittaro Cogentech - Consortium for Genomic Technologies via adamello, 16 20139 Milano Italy tel.: +39(02)574303007 e-mail: davide.cittaro@ifom-ieo-campus.it */
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Davide Cittaro