Can't edit galaxy workflow
Hi Guys, I updated to the latest galaxy distribution today and I cant seem to edit existing workflows. I've seen others with this error from a Sept 07 distribution ( http://dev.list.galaxyproject.org/Can-t-edit-Galaxy-Workflow-ElementInterface-instance-has-no-attribute-render-td4656393.html), but Jeremy Goecks mentioned that this might of been fixed in the Sept 20 distribution. Any ideas on how to fix this? Thanks, Richard Server error URL: http://127.0.0.1:8080/workflow/load_workflow?id=f597429621d6eb2b&_=1352495509531 Module weberror.evalexception.middleware:*364* in respond >> <http://127.0.0.1:8080/workflow/editor?id=f597429621d6eb2b#>app_iter *= * self*.*application*(*environ*,* detect_start_response*)* Module paste.debug.prints:*98* in __call__ >> <http://127.0.0.1:8080/workflow/editor?id=f597429621d6eb2b#>environ*,* self*.*app*)* Module paste.wsgilib:*539* in intercept_output >> <http://127.0.0.1:8080/workflow/editor?id=f597429621d6eb2b#>app_iter *= * application*(*environ*,* replacement_start_response*)* Module paste.recursive:*80* in __call__ >> <http://127.0.0.1:8080/workflow/editor?id=f597429621d6eb2b#>*return* self*.*application*(*environ*,* start_response*)* Module paste.httpexceptions:*632* in __call__ >> <http://127.0.0.1:8080/workflow/editor?id=f597429621d6eb2b#>*return* self*.*application*(*environ*,* start_response*)* Module galaxy.web.framework.base:*160* in __call__ >> <http://127.0.0.1:8080/workflow/editor?id=f597429621d6eb2b#>body *=* method*(* trans*,* ****kwargs *)* Module galaxy.web.framework:*73* in decorator >> <http://127.0.0.1:8080/workflow/editor?id=f597429621d6eb2b#>*return* simplejson*.*dumps*(* func*(* self*,* trans*,* ***args*,* ****kwargs *)* *)* Module galaxy.webapps.galaxy.controllers.workflow:*733* in load_workflow >> <http://127.0.0.1:8080/workflow/editor?id=f597429621d6eb2b#>'tooltip'*: * module*.*get_tooltip*(* static_path*=*url_for*(* '/static' *)* *)**,* Module galaxy.workflow.modules:*258* in get_tooltip >> <http://127.0.0.1:8080/workflow/editor?id=f597429621d6eb2b#>*return* self*.*tool*.*help*.*render*(* static_path*=*static_path *)* *AttributeError: 'NoneType' object has no attribute 'render'* []
Richard, This is fixed as of 5013377e0bf7. This may not be in the next distribution, but will be in the one after that. Of course, you can manually pull the change at any time. -Dannon On Nov 9, 2012, at 4:20 PM, Richard Park <rpark@bu.edu> wrote:
Hi Guys, I updated to the latest galaxy distribution today and I cant seem to edit existing workflows. I've seen others with this error from a Sept 07 distribution (http://dev.list.galaxyproject.org/Can-t-edit-Galaxy-Workflow-ElementInterfac...), but Jeremy Goecks mentioned that this might of been fixed in the Sept 20 distribution.
Any ideas on how to fix this? Thanks, Richard
Server error
URL: http://127.0.0.1:8080/workflow/load_workflow?id=f597429621d6eb2b&_=1352495509531 Module weberror.evalexception.middleware:364 in respond
app_iter = self.application(environ, detect_start_response) Module paste.debug.prints:98 in __call__ environ, self.app) Module paste.wsgilib:539 in intercept_output app_iter = application(environ, replacement_start_response) Module paste.recursive:80 in __call__ return self.application(environ, start_response) Module paste.httpexceptions:632 in __call__ return self.application(environ, start_response) Module galaxy.web.framework.base:160 in __call__ body = method( trans, **kwargs ) Module galaxy.web.framework:73 in decorator return simplejson.dumps( func( self, trans, *args, **kwargs ) ) Module galaxy.webapps.galaxy.controllers.workflow:733 in load_workflow 'tooltip': module.get_tooltip( static_path=url_for( '/static' ) ), Module galaxy.workflow.modules:258 in get_tooltip return self.tool.help.render( static_path=static_path ) AttributeError: 'NoneType' object has no attribute 'render' []
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participants (2)
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Dannon Baker
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Richard Park