Re: [galaxy-dev] galaxy-dev Digest, Vol 96, Issue 14
Hello, when i run my galaxy instance type: $ sh run.sh I get some error like this: Traceback (most recent call last): File "/export/galaxy-dist/lib/galaxy/webapps/galaxy/buildapp.py", line 38, in app_factory from galaxy.app import UniverseApplication File "/export/galaxy-dist/lib/galaxy/app.py", line 21, in <module> from galaxy.queue_worker import GalaxyQueueWorker File "/export/galaxy-dist/lib/galaxy/queue_worker.py", line 10, in <module> import galaxy.queues File "/export/galaxy-dist/lib/galaxy/queues.py", line 17, in <module> from kombu import Exchange, Queue File "/export/galaxy-dist/eggs/kombu-3.0.13-py2.7.egg/kombu/__init__.py", line 67, in __getattr__ module = __import__(object_origins[name], None, None, [name]) File "/export/galaxy-dist/eggs/kombu-3.0.13-py2.7.egg/kombu/entity.py", line 10, in <module> from .abstract import MaybeChannelBound File "/export/galaxy-dist/eggs/kombu-3.0.13-py2.7.egg/kombu/abstract.py", line 12, in <module> from .connection import maybe_channel File "/export/galaxy-dist/eggs/kombu-3.0.13-py2.7.egg/kombu/connection.py", line 24, in <module> from kombu import exceptions File "/export/galaxy-dist/eggs/kombu-3.0.13-py2.7.egg/kombu/exceptions.py", line 12, in <module> from amqp import ChannelError, ConnectionError, ResourceError File "/export/galaxy-dist/eggs/amqp-1.4.5-py2.7.egg/amqp/__init__.py", line 32, in <module> from .basic_message import Message # noqa File "/export/galaxy-dist/eggs/amqp-1.4.5-py2.7.egg/amqp/basic_message.py", line 19, in <module> from .serialization import GenericContent File "/export/galaxy-dist/eggs/amqp-1.4.5-py2.7.egg/amqp/serialization.py", line 33, in <module> from .five import int_types, long_t, string, string_t, items File "/export/galaxy-dist/eggs/amqp-1.4.5-py2.7.egg/amqp/five.py", line 171, in <module> librt = ctypes.CDLL('librt.so.1', use_errno=True) TypeError: __init__() got an unexpected keyword argument 'use_errno' I have no idea why this happend. How can I fix it?
This is a new one for me. What configuration are you using for both your 'database_connection', and the 'amqp_internal_connection' in your universe_wsgi.ini? On Fri, Jun 13, 2014 at 12:29 AM, xlwang <xlwang_0903@163.com> wrote:
Hello, when i run my galaxy instance type: $ sh run.sh I get some error like this: Traceback (most recent call last): File "/export/galaxy-dist/lib/galaxy/webapps/galaxy/buildapp.py", line 38, in app_factory from galaxy.app import UniverseApplication File "/export/galaxy-dist/lib/galaxy/app.py", line 21, in <module> from galaxy.queue_worker import GalaxyQueueWorker File "/export/galaxy-dist/lib/galaxy/queue_worker.py", line 10, in <module> import galaxy.queues File "/export/galaxy-dist/lib/galaxy/queues.py", line 17, in <module> from kombu import Exchange, Queue File "/export/galaxy-dist/eggs/kombu-3.0.13-py2.7.egg/kombu/__init__.py", line 67, in __getattr__ module = __import__(object_origins[name], None, None, [name]) File "/export/galaxy-dist/eggs/kombu-3.0.13-py2.7.egg/kombu/entity.py", line 10, in <module> from .abstract import MaybeChannelBound File "/export/galaxy-dist/eggs/kombu-3.0.13-py2.7.egg/kombu/abstract.py", line 12, in <module> from .connection import maybe_channel File "/export/galaxy-dist/eggs/kombu-3.0.13-py2.7.egg/kombu/connection.py", line 24, in <module> from kombu import exceptions File "/export/galaxy-dist/eggs/kombu-3.0.13-py2.7.egg/kombu/exceptions.py", line 12, in <module> from amqp import ChannelError, ConnectionError, ResourceError File "/export/galaxy-dist/eggs/amqp-1.4.5-py2.7.egg/amqp/__init__.py", line 32, in <module> from .basic_message import Message # noqa File "/export/galaxy-dist/eggs/amqp-1.4.5-py2.7.egg/amqp/basic_message.py", line 19, in <module> from .serialization import GenericContent File "/export/galaxy-dist/eggs/amqp-1.4.5-py2.7.egg/amqp/serialization.py", line 33, in <module> from .five import int_types, long_t, string, string_t, items File "/export/galaxy-dist/eggs/amqp-1.4.5-py2.7.egg/amqp/five.py", line 171, in <module> librt = ctypes.CDLL('librt.so.1', use_errno=True) TypeError: __init__() got an unexpected keyword argument 'use_errno'
I have no idea why this happend. How can I fix it?
___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/
participants (2)
-
Dannon Baker
-
xlwang