Dear mailing list, What is the expected behavior if I click in the Admin area under "Search Tool Shed" on the "Galaxy Main Tool Shed" button (or any of the Browse .. or Search .. actions that are available via the black triangle submenu)? I remember that a new tab with the corresponding Tool Shed page opened in the browser. This is currently not happening in my installation. What could be the problem? As a work around I can trigger the Browse action via right click and "open link in new tab". As far as I can see this is not a JavaScript problem. Best, Matthias -- ------------------------------------------- Matthias Bernt Bioinformatics Service Molekulare Systembiologie (MOLSYB) Helmholtz-Zentrum für Umweltforschung GmbH - UFZ/ Helmholtz Centre for Environmental Research GmbH - UFZ Permoserstraße 15, 04318 Leipzig, Germany Phone +49 341 235 482296, m.bernt@ufz.de, www.ufz.de Sitz der Gesellschaft/Registered Office: Leipzig Registergericht/Registration Office: Amtsgericht Leipzig Handelsregister Nr./Trade Register Nr.: B 4703 Vorsitzender des Aufsichtsrats/Chairman of the Supervisory Board: MinDirig Wilfried Kraus Wissenschaftlicher Geschäftsführer/Scientific Managing Director: Prof. Dr. Dr. h.c. Georg Teutsch Administrative Geschäftsführerin/ Administrative Managing Director: Prof. Dr. Heike Graßmann -------------------------------------------
Hi Matthias, it is supposed to open an iframe in the right panel with view of MTS categories for browsing. Do you see a warning icon in the right of your browser's URL bar? I think I saw this before when there was https/https mismatch. How does your config/tool_sheds_conf.xml look like? Do you see any errors/warnings in the browser's JS console? Martin On Wed, Mar 8, 2017 at 9:56 AM Matthias Bernt <m.bernt@ufz.de> wrote:
Dear mailing list,
What is the expected behavior if I click in the Admin area under "Search Tool Shed" on the "Galaxy Main Tool Shed" button (or any of the Browse .. or Search .. actions that are available via the black triangle submenu)?
I remember that a new tab with the corresponding Tool Shed page opened in the browser.
This is currently not happening in my installation. What could be the problem? As a work around I can trigger the Browse action via right click and "open link in new tab".
As far as I can see this is not a JavaScript problem.
Best, Matthias
--
------------------------------------------- Matthias Bernt Bioinformatics Service Molekulare Systembiologie (MOLSYB) Helmholtz-Zentrum für Umweltforschung GmbH - UFZ/ Helmholtz Centre for Environmental Research GmbH - UFZ Permoserstraße 15, 04318 Leipzig, Germany Phone +49 341 235 482296 <+49%20341%20235482296>, m.bernt@ufz.de, www.ufz.de
Sitz der Gesellschaft/Registered Office: Leipzig Registergericht/Registration Office: Amtsgericht Leipzig Handelsregister Nr./Trade Register Nr.: B 4703 Vorsitzender des Aufsichtsrats/Chairman of the Supervisory Board: MinDirig Wilfried Kraus Wissenschaftlicher Geschäftsführer/Scientific Managing Director: Prof. Dr. Dr. h.c. Georg Teutsch Administrative Geschäftsführerin/ Administrative Managing Director: Prof. Dr. Heike Graßmann -------------------------------------------
___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: https://lists.galaxyproject.org/
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Hi Martin, thanks for your reply. The reason was the Privacy Badger browser plugin. Might it be that data is exchanged with the toolshed page? Anyway, I disabled the plugin and the page works. Best, Matthias On 08.03.2017 16:20, Martin Čech wrote:
Hi Matthias,
it is supposed to open an iframe in the right panel with view of MTS categories for browsing. Do you see a warning icon in the right of your browser's URL bar? I think I saw this before when there was https/https mismatch. How does your config/tool_sheds_conf.xml look like? Do you see any errors/warnings in the browser's JS console?
Martin
On Wed, Mar 8, 2017 at 9:56 AM Matthias Bernt <m.bernt@ufz.de <mailto:m.bernt@ufz.de>> wrote:
Dear mailing list,
What is the expected behavior if I click in the Admin area under "Search Tool Shed" on the "Galaxy Main Tool Shed" button (or any of the Browse .. or Search .. actions that are available via the black triangle submenu)?
I remember that a new tab with the corresponding Tool Shed page opened in the browser.
This is currently not happening in my installation. What could be the problem? As a work around I can trigger the Browse action via right click and "open link in new tab".
As far as I can see this is not a JavaScript problem.
Best, Matthias
--
------------------------------------------- Matthias Bernt Bioinformatics Service Molekulare Systembiologie (MOLSYB) Helmholtz-Zentrum für Umweltforschung GmbH - UFZ/ Helmholtz Centre for Environmental Research GmbH - UFZ Permoserstraße 15, 04318 Leipzig, Germany Phone +49 341 235 482296 <tel:+49%20341%20235482296>, m.bernt@ufz.de <mailto:m.bernt@ufz.de>, www.ufz.de <http://www.ufz.de>
Sitz der Gesellschaft/Registered Office: Leipzig Registergericht/Registration Office: Amtsgericht Leipzig Handelsregister Nr./Trade Register Nr.: B 4703 Vorsitzender des Aufsichtsrats/Chairman of the Supervisory Board: MinDirig Wilfried Kraus Wissenschaftlicher Geschäftsführer/Scientific Managing Director: Prof. Dr. Dr. h.c. Georg Teutsch Administrative Geschäftsführerin/ Administrative Managing Director: Prof. Dr. Heike Graßmann -------------------------------------------
___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: https://lists.galaxyproject.org/
To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/
-- ------------------------------------------- Matthias Bernt Bioinformatics Service Molekulare Systembiologie (MOLSYB) Helmholtz-Zentrum für Umweltforschung GmbH - UFZ/ Helmholtz Centre for Environmental Research GmbH - UFZ Permoserstraße 15, 04318 Leipzig, Germany Phone +49 341 235 482296, m.bernt@ufz.de, www.ufz.de Sitz der Gesellschaft/Registered Office: Leipzig Registergericht/Registration Office: Amtsgericht Leipzig Handelsregister Nr./Trade Register Nr.: B 4703 Vorsitzender des Aufsichtsrats/Chairman of the Supervisory Board: MinDirig Wilfried Kraus Wissenschaftlicher Geschäftsführer/Scientific Managing Director: Prof. Dr. Dr. h.c. Georg Teutsch Administrative Geschäftsführerin/ Administrative Managing Director: Prof. Dr. Heike Graßmann -------------------------------------------
The Tool Shed itself is loaded into the iframe (served from a different domain) - that is why some more strict security settings have problems with it. M. On Thu, Mar 9, 2017 at 2:52 PM Matthias Bernt <m.bernt@ufz.de> wrote:
Hi Martin,
thanks for your reply. The reason was the Privacy Badger browser plugin. Might it be that data is exchanged with the toolshed page?
Anyway, I disabled the plugin and the page works.
Best, Matthias
On 08.03.2017 16:20, Martin Čech wrote:
Hi Matthias,
it is supposed to open an iframe in the right panel with view of MTS categories for browsing. Do you see a warning icon in the right of your browser's URL bar? I think I saw this before when there was https/https mismatch. How does your config/tool_sheds_conf.xml look like? Do you see any errors/warnings in the browser's JS console?
Martin
On Wed, Mar 8, 2017 at 9:56 AM Matthias Bernt <m.bernt@ufz.de <mailto:m.bernt@ufz.de>> wrote:
Dear mailing list,
What is the expected behavior if I click in the Admin area under "Search Tool Shed" on the "Galaxy Main Tool Shed" button (or any of the Browse .. or Search .. actions that are available via the black triangle submenu)?
I remember that a new tab with the corresponding Tool Shed page opened in the browser.
This is currently not happening in my installation. What could be the problem? As a work around I can trigger the Browse action via right click and "open link in new tab".
As far as I can see this is not a JavaScript problem.
Best, Matthias
--
------------------------------------------- Matthias Bernt Bioinformatics Service Molekulare Systembiologie (MOLSYB) Helmholtz-Zentrum für Umweltforschung GmbH - UFZ/ Helmholtz Centre for Environmental Research GmbH - UFZ Permoserstraße 15, 04318 Leipzig, Germany Phone +49 341 235 482296 <+49%20341%20235482296> <tel:+49%20341%20235482296>, m.bernt@ufz.de <mailto:m.bernt@ufz.de>, www.ufz.de < http://www.ufz.de>
Sitz der Gesellschaft/Registered Office: Leipzig Registergericht/Registration Office: Amtsgericht Leipzig Handelsregister Nr./Trade Register Nr.: B 4703 Vorsitzender des Aufsichtsrats/Chairman of the Supervisory Board: MinDirig Wilfried Kraus Wissenschaftlicher Geschäftsführer/Scientific Managing Director: Prof. Dr. Dr. h.c. Georg Teutsch Administrative Geschäftsführerin/ Administrative Managing Director: Prof. Dr. Heike Graßmann -------------------------------------------
___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: https://lists.galaxyproject.org/
To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/
--
------------------------------------------- Matthias Bernt Bioinformatics Service Molekulare Systembiologie (MOLSYB) Helmholtz-Zentrum für Umweltforschung GmbH - UFZ/ Helmholtz Centre for Environmental Research GmbH - UFZ Permoserstraße 15, 04318 Leipzig, Germany Phone +49 341 235 482296 <+49%20341%20235482296>, m.bernt@ufz.de, www.ufz.de
Sitz der Gesellschaft/Registered Office: Leipzig Registergericht/Registration Office: Amtsgericht Leipzig Handelsregister Nr./Trade Register Nr.: B 4703 Vorsitzender des Aufsichtsrats/Chairman of the Supervisory Board: MinDirig Wilfried Kraus Wissenschaftlicher Geschäftsführer/Scientific Managing Director: Prof. Dr. Dr. h.c. Georg Teutsch Administrative Geschäftsführerin/ Administrative Managing Director: Prof. Dr. Heike Graßmann -------------------------------------------
participants (2)
-
Martin Čech -
Matthias Bernt