New subject: Fwd: how to add check-boxes and button in new page

3 Jul 2012

      Hello,

The first thing is absolutely new to the python.

  I am trying to integrate data-grid with GALAXY to host the pubchem data.
For doing so I have created one .mako to add page and added one function in
user.py. it adds one button as shown in the attachment. on click of the
button it redirects to new page where the output is displayed as shown in
the image file galaxy-op.png in attachment.

My requirment is to have check boxes against the list of the files and add
one button upload in the page shown in the file attached galaxy-op.png,
which when clicked upload the data from the data-grid using some python
script to local point.

Kindly guide on that what to do.

The changes done so far i present down:

In the file /root/galaxy-dist/lib/galaxy/web/controllers/user.py

Added :

 def gsrm_data( self, trans, webapp='galaxy'):

        # session = trans.sa_session
        # user = session.query( model.User ).filter_by( username=username
).first()
         user = trans.get_user()
         prxy="/root/x509up_u3163"
         refresh_frames = [ 'masthead']
         os.environ["X509_USER_PROXY"]=prxy

os.environ["PATH"]=os.environ["PATH"]+":/usr/local/GLOBUS-4.0.8/bin/:/usr/local/dpm/bin/:/usr/local/glite/bin"

os.environ["LD_LIBRARY_PATH"]="/usr/local/GLOBUS-4.0.8/lib:/usr/local/dpm/lib:/usr/local/dpm/lib64:/usr/local/glite/lib"
         os.putenv('LD_LIBRARY_PATH',
"/usr/local/GLOBUS-4.0.8/lib:/usr/local/dpm/lib:/usr/local/dpm/lib64:/usr/local/glite/lib")
         os.environ["DPM_HOST"]="gsrm"
         os.environ["DPNS_HOST"]="gsrm"
         proc = subprocess.Popen(['dpns-ls -l /dpm/
ctsf.cdac.org.in/home/OSDD/pubchem',prxy], shell=True,
stdout=subprocess.PIPE,stdin=subprocess.PIPE)
         gsrm_output=proc.communicate()[0]
         sub_str=gsrm_output.split()
         index=8
         count=0

str1='<table><tr><td>'+user.email+user.username+"slno"+'</td><td>'+"Gsrm_FileName
"+'</td><td>'+"GSRM_URL"+'</td></tr><tr><td>'
         while (index < len(sub_str)):
             count=count+1

str1=str1+str(count)+'</td><td>'+sub_str[index]+'</td><td></td><td>'+"/dpm/
ctsf.cdac.org.in/home/OSDD/pubchem/"+sub_str[index]+'</td></tr><tr><td>'
             index = index + 9
         str1=str1+'</td></tr></table>'

   return trans.fill_template( '/sindex.mako',
                                    webapp=webapp,
                                    refresh_frames=refresh_frames,
                                    message=str1,
                                    status='done',
                                    active_view="user" )

    @web.expose

created  /root/galaxy-dist/templates/sindex.mako

<%!
    def inherit(context):
        if context.get('webapp'):
            webapp = context.get('webapp')
        else:
            webapp = 'galaxy'
        return '/webapps/%s/base_panels.mako' % webapp
%>
<%inherit file="${inherit(context)}"/>
<%namespace file="/messagex.mako" import="render_msg" />

<%def name="init()">
<%
    self.has_left_panel=False
    self.has_right_panel=False
    self.message_box_visible=False
    self.active_view="user"
    self.overlay_visible=False
%>
</%def>

<%def name="stylesheets()">
    ${parent.stylesheets()}
    <style>
        div#center {
            padding: 10px;
        }
    </style>
</%def>
<%def name="title()">Galaxy :: Logout</%def>

<%def name="center_panel()">
    ${self.body()}
</%def>

<%def name="body()">
    %if message:
        ${render_msg( message, status )}
    %endif
</%def>

___________________________________________________________________________________________

Please help!!!!

Regards
Neetu Sharma

how to add check-boxes and button in new page

Neetu Ojha

Neetu Ojha

Neetu Ojha

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