Is there any documentation on how exported workflow with '.ga' extension are structured? We are looking for the ability to create our workflows without using the workflow editor thru the web portal.
Thanks
Takadonet
Nothing formal. The .ga extension is simply the workflow dictionary exported as .json, if that helps -- there's no extra magic to the format. You may want to look at the workflow API, some users have had success integrating workflows created on the fly using it.
-Dannon
On Mon, Oct 7, 2013 at 11:19 AM, Philip Mabon philipmabon@gmail.com wrote:
Is there any documentation on how exported workflow with '.ga' extension are structured? We are looking for the ability to create our workflows without using the workflow editor thru the web portal.
Thanks
Takadonet
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API allows for importing and exporting of workflows but nothing for creating a new workflow. I will dig and see if anyone has published or presented on their internal libraries that create workflows on the fly. Thanks
Takadonet
On Mon, Oct 7, 2013 at 11:18 AM, Dannon Baker dannon.baker@gmail.comwrote:
Nothing formal. The .ga extension is simply the workflow dictionary exported as .json, if that helps -- there's no extra magic to the format. You may want to look at the workflow API, some users have had success integrating workflows created on the fly using it.
-Dannon
On Mon, Oct 7, 2013 at 11:19 AM, Philip Mabon philipmabon@gmail.comwrote:
Is there any documentation on how exported workflow with '.ga' extension are structured? We are looking for the ability to create our workflows without using the workflow editor thru the web portal.
Thanks
Takadonet
Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/
Right, so you'd assemble the json clientside and use /api/workflows/upload to create it. See the import_new_workflow method for more details
On Mon, Oct 7, 2013 at 12:31 PM, Philip Mabon philipmabon@gmail.com wrote:
API allows for importing and exporting of workflows but nothing for creating a new workflow. I will dig and see if anyone has published or presented on their internal libraries that create workflows on the fly. Thanks
Takadonet
On Mon, Oct 7, 2013 at 11:18 AM, Dannon Baker dannon.baker@gmail.comwrote:
Nothing formal. The .ga extension is simply the workflow dictionary exported as .json, if that helps -- there's no extra magic to the format. You may want to look at the workflow API, some users have had success integrating workflows created on the fly using it.
-Dannon
On Mon, Oct 7, 2013 at 11:19 AM, Philip Mabon philipmabon@gmail.comwrote:
Is there any documentation on how exported workflow with '.ga' extension are structured? We are looking for the ability to create our workflows without using the workflow editor thru the web portal.
Thanks
Takadonet
Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/
galaxy-dev@lists.galaxyproject.org
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Dannon Baker -
Philip Mabon