Dear all,
I am currently trying to find a way to decrease the time the users need to wait to permanently delete their data sets. In galaxy I read the following "Histories that have been deleted for more than a time period specified by the Galaxy administrator(s) may be permanently deleted."; I am wondering where can I configure this option in my local instance of galaxy. I have looked for such an option in the universe_wsgi.ini file but I have not found it. I would greatly appreciate if someone can point me to the right direction to modify this.
Thank you all, --Ricardo Perez
Hi Ricardo,
You might want to take a look at this[1] page in the wiki. The short answer is there is no way to configure purging datasets in Galaxy itself. It would be nice to do so. Galaxy does provide an external script that can be easily put in a cron job to do this. The script is cleanup_dataset.py and you want to take a look at option "-d".
[1]http://wiki.galaxyproject.org/Admin/Config/Performance/Purge%20Histories%20a...
Hope it helps, Carlos
On Tue, Jul 2, 2013 at 1:09 AM, Perez, Ricardo ricky_pz2@neo.tamu.edu wrote:
Dear all,
I am currently trying to find a way to decrease the time the users need to wait to permanently delete their data sets. In galaxy I read the following "Histories that have been deleted for more than a time period specified by the Galaxy administrator(s) may be permanently deleted."; I am wondering where can I configure this option in my local instance of galaxy. I have looked for such an option in the universe_wsgi.ini file but I have not found it. I would greatly appreciate if someone can point me to the right direction to modify this.
Thank you all, --Ricardo Perez ___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
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Ricardo,
You can configure galaxy such that it will allow users to permanently delete and purge datasets from their own histories. After deleting by pressing the cross...select 'include deleted datasets' from the history menu. There you can undelete but also purge immediately from disk.
So if they are in a hurry or need the space within their quota they can do it like that... see scrndmp.
[cid:image001.png@01CE7D4B.F292A8C0]
Hope this helped,
Alex
-----Oorspronkelijk bericht----- Van: galaxy-dev-bounces@lists.bx.psu.edu [mailto:galaxy-dev-bounces@lists.bx.psu.edu] Namens Perez, Ricardo Verzonden: dinsdag 2 juli 2013 7:09 Aan: galaxy-dev@lists.bx.psu.edu Onderwerp: [galaxy-dev] Configuring the time of permanently deleting data sets.
Dear all,
I am currently trying to find a way to decrease the time the users need to wait to permanently delete their data sets. In galaxy I read the following "Histories that have been deleted for more than a time period specified by the Galaxy administrator(s) may be permanently deleted."; I am wondering where can I configure this option in my local instance of galaxy. I have looked for such an option in the universe_wsgi.ini file but I have not found it. I would greatly appreciate if someone can point me to the right direction to modify this.
Thank you all,
--Ricardo Perez
___________________________________________________________
Please keep all replies on the list by using "reply all"
in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at:
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Bossers, Alex -
Carlos Borroto -
Perez, Ricardo