Re: [galaxy-dev] Duplicated entries in "Manage installed tool shed repositories" table
On Wed, Aug 14, 2013 at 11:08 PM, Ross <ross.lazarus@gmail.com> wrote:
FWIW: I've managed to produce a few of these too - generally arose after futzing with a failed dependency, reaching for the "nuke it" ( 'completely remove' tool) button, then reinstalling it - sometimes there's a complaint that the same version was previously installed (even though it had been supposedly totally nuked), sometimes not - but occasionally a white 'new' ghost will reappear in the manage installed tools list after reinstallation - AFAIK those white ghosts are impossible to remove...
Thanks Ross, It is good to know this isn't an isolated problem - and I too had been "nuking" failed installs, starting with the July 2013 galaxy-dist but also the August galaxy-dist. Maybe that will help Dave reproduce it? I like your name "white ghost" for this since the "new" entry is shown on with a white background (it didn't show up in the HTML email sadly). Peter
Peter and Ross, I've not been able to reproduce this behavior, most likely because I am not following the precise steps you've used when you see it. Can you clarify what you do when you encounter it? Thanks! Greg Von Kuster On Aug 15, 2013, at 4:50 AM, Peter Cock <p.j.a.cock@googlemail.com> wrote:
On Wed, Aug 14, 2013 at 11:08 PM, Ross <ross.lazarus@gmail.com> wrote: FWIW: I've managed to produce a few of these too - generally arose after futzing with a failed dependency, reaching for the "nuke it" ( 'completely remove' tool) button, then reinstalling it - sometimes there's a complaint that the same version was previously installed (even though it had been supposedly totally nuked), sometimes not - but occasionally a white 'new' ghost will reappear in the manage installed tools list after reinstallation - AFAIK those white ghosts are impossible to remove...
Thanks Ross,
It is good to know this isn't an isolated problem - and I too had been "nuking" failed installs, starting with the July 2013 galaxy-dist but also the August galaxy-dist. Maybe that will help Dave reproduce it?
I like your name "white ghost" for this since the "new" entry is shown on with a white background (it didn't show up in the HTML email sadly).
Peter
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On Tue, Aug 20, 2013 at 8:34 PM, Greg Von Kuster <greg@bx.psu.edu> wrote:
Peter and Ross,
I've not been able to reproduce this behavior, most likely because I am not following the precise steps you've used when you see it. Can you clarify what you do when you encounter it?
Thanks!
Greg Von Kuster
If it happens to me again, I'll try to narrow down what triggered it. Meanwhile this sounds like another "white ghost" tool stuck in the "new" state: http://lists.bx.psu.edu/pipermail/galaxy-dev/2013-August/016193.html Peter
Thanks Peter, As soon as I can get the steps to produce "white ghost", I'll get a fix committed - I've not been able to produce one yet. Greg Von Kuster On Aug 21, 2013, at 5:41 AM, Peter Cock <p.j.a.cock@googlemail.com> wrote:
On Tue, Aug 20, 2013 at 8:34 PM, Greg Von Kuster <greg@bx.psu.edu> wrote:
Peter and Ross,
I've not been able to reproduce this behavior, most likely because I am not following the precise steps you've used when you see it. Can you clarify what you do when you encounter it?
Thanks!
Greg Von Kuster
If it happens to me again, I'll try to narrow down what triggered it.
Meanwhile this sounds like another "white ghost" tool stuck in the "new" state:
http://lists.bx.psu.edu/pipermail/galaxy-dev/2013-August/016193.html
Peter
We should create a Tool Shed Hackathon, I'm an expert in producing 'white ghosts' :)
Thanks Peter,
As soon as I can get the steps to produce "white ghost", I'll get a fix committed - I've not been able to produce one yet.
Greg Von Kuster
On Aug 21, 2013, at 5:41 AM, Peter Cock <p.j.a.cock@googlemail.com> wrote:
On Tue, Aug 20, 2013 at 8:34 PM, Greg Von Kuster <greg@bx.psu.edu> wrote:
Peter and Ross,
I've not been able to reproduce this behavior, most likely because I am not following the precise steps you've used when you see it. Can you clarify what you do when you encounter it?
Thanks!
Greg Von Kuster
If it happens to me again, I'll try to narrow down what triggered it.
Meanwhile this sounds like another "white ghost" tool stuck in the "new" state:
http://lists.bx.psu.edu/pipermail/galaxy-dev/2013-August/016193.html
Peter
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participants (3)
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Bjoern Gruening
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Greg Von Kuster
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Peter Cock