Dear All,
Could you please tell where or how I could get the list of multi-threaded tools and the amount of threads they open by default?
Thanks a lot
Jean-François
PS: I have collected the following list by hands: #Tool_id Num_thread gatk_count_covariates 4 gatk_realigner_target_creator 4 gatk_unified_genotyper 4 gatk_variant_eval 4 gatk_variant_recalibrator 4 gatk_variant_select 4 bfast_wrapper 4 bowtie2 4 bowtie_color_wrapper 4 bowtie_wrapper 4 bwa_color_wrapper 4 bwa_wrapper 4 cuffdiff 4 cufflinks 4 cuffmerge 4 tophat2 4 tophat_color 4 tophat 4
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