Hello,
I'm trying to set our Galaxy instance to put Dataset and Temporary files on a Symlinked drive, as there isn't sufficient room on the Galaxy server to handle those files. However, I can't get it to work. Even though I've changed these settings, Galaxy still seems to be creating large numbers of files in our local database directory. Am I missing something here? I'm including the relevant section of my galaxy.ini:
# -- Files and directories
# Dataset files are stored in this directory. #file_path = database/files file_path = /data/galaxy/database/files
# Temporary files are stored in this directory. #new_file_path = database/tmp new_file_path = /data/galaxy/tmp
Thanks!
Hi Scott, in which subdirectory of database/ are files being created?
The only other relevant directive in galaxy.ini should be:
#job_working_directory = database/job_working_directory
Cheers, Nicola
On 06/04/16 21:27, Scott Szakonyi wrote:
Hello,
I'm trying to set our Galaxy instance to put Dataset and Temporary files on a Symlinked drive, as there isn't sufficient room on the Galaxy server to handle those files. However, I can't get it to work. Even though I've changed these settings, Galaxy still seems to be creating large numbers of files in our local database directory. Am I missing something here? I'm including the relevant section of my galaxy.ini:
# -- Files and directories
# Dataset files are stored in this directory. #file_path = database/files file_path = /data/galaxy/database/files
# Temporary files are stored in this directory. #new_file_path = database/tmp new_file_path = /data/galaxy/tmp
Thanks!
-- Scott B. Szakonyi Research Programmer
*Center for Research Computing* 107 Information Technology Center Notre Dame, IN 46556 http://crc.nd.edu http://crc.nd.edu/
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