tmp file under database/tmp get regenerated after restarting Galaxy
Dear Galaxy Developers, I am using Galaxy version 15.10 on my server, load-balancing is enabled. I found a problem when running the jobs. When there are running jobs and if I restart the Galaxy process at this time, the job will fail at the end of the job with the error message such as: IOError: [Errno 2] No such file or directory: '/galaxy/database/tmp/tmpleXN4b' That tmp file doesn't exist, I guess it is because when Galaxy process get restarted, the tmp file get regenerated, so the job cannot find the correct tmp file, then it was failed. Do you think this is a known issue, and is there a fix for this? Thank you in advance! Mark
Hi, Just want to follow up this request. We hope to have some tips about how to investigate this problem. Because of this issue, we cannot restart Galaxy when there are running jobs. Thanks, Mark 2016-11-15 16:52 GMT-06:00 Mark Xiao <mustxyk@gmail.com>:
Dear Galaxy Developers,
I am using Galaxy version 15.10 on my server, load-balancing is enabled. I found a problem when running the jobs. When there are running jobs and if I restart the Galaxy process at this time, the job will fail at the end of the job with the error message such as:
IOError: [Errno 2] No such file or directory: '/galaxy/database/tmp/ tmpleXN4b'
That tmp file doesn't exist, I guess it is because when Galaxy process get restarted, the tmp file get regenerated, so the job cannot find the correct tmp file, then it was failed. Do you think this is a known issue, and is there a fix for this?
Thank you in advance! Mark
participants (1)
-
Mark Xiao