data visualization in galaxy trackster
Hi Galaxy team, I am trying to visualize data in galaxy using trackster. I made necessary requirement based on the documentation in http://bitbucket.org/galaxy/galaxy-central/wiki/Visualization. My data set in wiggle variableStep format. below here is few lines from my wiggle file track type=wiggle_0 name="test run" variableStep chrom=III 1841 1 1842 1 1843 1 1844 1 1845 1 1846 1 1847 1 1848 1 1849 1 1850 1 1851 1 1852 1 1853 1 It is about 3.2MB in size and I tried to create a new track browser in my local galaxy instance. Unfortunately it just shows the message "Loading data ..." for the last five hours. Any ideas are sincerely appreciated. many thanks, Vipin T S
Hi Vipin, Please send me your dataset and I will take a look. Thanks, Kanwei On Fri, Apr 30, 2010 at 12:19 PM, Vipin TS <vipin.ts@gmail.com> wrote:
Hi Galaxy team,
I am trying to visualize data in galaxy using trackster. I made necessary requirement based on the documentation in http://bitbucket.org/galaxy/galaxy-central/wiki/Visualization. My data set in wiggle variableStep format. below here is few lines from my wiggle file
track type=wiggle_0 name="test run" variableStep chrom=III 1841 1 1842 1 1843 1 1844 1 1845 1 1846 1 1847 1 1848 1 1849 1 1850 1 1851 1 1852 1 1853 1
It is about 3.2MB in size and I tried to create a new track browser in my local galaxy instance. Unfortunately it just shows the message "Loading data ..." for the last five hours.
Any ideas are sincerely appreciated.
many thanks, Vipin T S
_______________________________________________ galaxy-dev mailing list galaxy-dev@lists.bx.psu.edu http://lists.bx.psu.edu/listinfo/galaxy-dev
Hi Kanwei, Thanks for considering my request. Here I am attaching my wiggle file, please find it. many thanks, Vipin On 30 April 2010 20:18, Kanwei Li <kanwei@gmail.com> wrote:
Hi Vipin,
Please send me your dataset and I will take a look.
Thanks,
Kanwei
On Fri, Apr 30, 2010 at 12:19 PM, Vipin TS <vipin.ts@gmail.com> wrote:
Hi Galaxy team,
I am trying to visualize data in galaxy using trackster. I made necessary requirement based on the documentation in http://bitbucket.org/galaxy/galaxy-central/wiki/Visualization. My data set in wiggle variableStep format. below here is few lines from my wiggle file
track type=wiggle_0 name="test run" variableStep chrom=III 1841 1 1842 1 1843 1 1844 1 1845 1 1846 1 1847 1 1848 1 1849 1 1850 1 1851 1 1852 1 1853 1
It is about 3.2MB in size and I tried to create a new track browser in my local galaxy instance. Unfortunately it just shows the message "Loading data ..." for the last five hours.
Any ideas are sincerely appreciated.
many thanks, Vipin T S
_______________________________________________ galaxy-dev mailing list galaxy-dev@lists.bx.psu.edu http://lists.bx.psu.edu/listinfo/galaxy-dev
participants (2)
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Kanwei Li
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Vipin TS