assembly statistics dependencies
Dear all, I'm trying to use the tool assembly statistics in the 'PacBio/Illumina Assembly' section but I have the following error message: /Traceback (most recent call last): File "/home/galaxy/galaxy_dist/tools/ilmn_pacbio/assembly_stats.py", line 7, in <module> from pbpy.io.FastaIO import FastaEntry, SimpleFastaReader ImportError: No module named pbpy.io.FastaIO / Can someone tell me where to find the module pbpy, I couldn't find this information in the Galaxy wiki. Thanks in advance/, /Yann/ /
Yann: These tools are for testing only, and not yet supported/distributed. Thanks, anton Anton Nekrutenko http://nekrut.bx.psu.edu http://usegalaxy.org On Jun 25, 2011, at 11:11 PM, Yann Surget-Groba wrote:
Dear all, I'm trying to use the tool assembly statistics in the 'PacBio/Illumina Assembly' section but I have the following error message: Traceback (most recent call last): File "/home/galaxy/galaxy_dist/tools/ilmn_pacbio/assembly_stats.py", line 7, in <module> from pbpy.io.FastaIO import FastaEntry, SimpleFastaReader ImportError: No module named pbpy.io.FastaIO
Can someone tell me where to find the module pbpy, I couldn't find this information in the Galaxy wiki. Thanks in advance, Yann ___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at:
participants (2)
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Anton Nekrutenko
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Yann Surget-Groba