Is this a bug you want in trello? got this back trace when attempting to get updates to the picard tool 172.17.130.111 - - [06/Feb/2015:13:45:55 -0400] "POST /library_common/library_item_updates HTTP/1.0" 200 - "http://galaxy.neb.com/library_common/browse_library?sort=name&f-description=All&f-name=All&cntrller=library&operation=browse&id=561559e3cb6b83cb" "Mozilla/5.0 (Macintosh; Intel Mac OS X 10_9_5) AppleWebKit/537.36 (KHTML, like Gecko) Chrome/40.0.2214.111 Safari/537.36" galaxy.tools.data WARNING 2015-02-06 13:45:57,640 Cannot find index file '/mnt/galaxy/data/galaxy/tmp/tmp-toolshed-gmfcr_ys2eZ/picard_index.loc' for tool data table 'picard_indexes' galaxy.tools.data DEBUG 2015-02-06 13:45:57,641 Loading another instance of data table 'picard_indexes', attempting to merge content. galaxy.tools.data DEBUG 2015-02-06 13:45:58,724 Loading another instance of data table 'picard_indexes', attempting to merge content. galaxy.tools.data DEBUG 2015-02-06 13:45:59,161 Loading another instance of data table 'picard_indexes', attempting to merge content. galaxy.tools.data DEBUG 2015-02-06 13:45:59,307 Loading another instance of data table 'picard_indexes', attempting to merge content. galaxy.tools.data DEBUG 2015-02-06 13:45:59,814 Loading another instance of data table 'picard_indexes', attempting to merge content. galaxy.tools.data DEBUG 2015-02-06 13:45:59,981 Loading another instance of data table 'picard_indexes', attempting to merge content. 172.17.130.111 - - [06/Feb/2015:13:46:00 -0400] "POST /library_common/library_item_updates HTTP/1.0" 200 - "http://galaxy.neb.com/library_common/browse_library?sort=name&f-description=All&f-name=All&cntrller=library&operation=browse&id=561559e3cb6b83cb" "Mozilla/5.0 (Macintosh; Intel Mac OS X 10_9_5) AppleWebKit/537.36 (KHTML, like Gecko) Chrome/40.0.2214.111 Safari/537.36" galaxy.tools.data DEBUG 2015-02-06 13:46:01,205 Loading another instance of data table 'picard_indexes', attempting to merge content. galaxy.tools.data DEBUG 2015-02-06 13:46:01,380 Loading another instance of data table 'picard_indexes', attempting to merge content. 172.17.130.190 - - [06/Feb/2015:13:45:50 -0400] "GET /admin_toolshed/update_to_changeset_revision?tool_shed_url=https://toolshed.g2.bx.psu.edu/&name=picard&owner=devteam&changeset_revision=e0232cbac965&latest_changeset_revision=bf1c3f9f8282&latest_ctx_rev=3 HTTP/1.0" 500 - "http://galaxy.neb.com/admin_toolshed/browse_repositories" "Mozilla/5.0 (Macintosh; Intel Mac OS X 10_10_1) AppleWebKit/537.36 (KHTML, like Gecko) Chrome/39.0.2171.95 Safari/537.36" Error - <type 'exceptions.AttributeError'>: 'list' object has no attribute 'iteritems' URL: http://galaxy.neb.com/admin_toolshed/update_to_changeset_revision?tool_shed_url=https://toolshed.g2.bx.psu.edu/&name=picard&owner=devteam&changeset_revision=e0232cbac965&latest_changeset_revision=bf1c3f9f8282&latest_ctx_rev=3 File '/mnt/galaxy/data/galaxy/galaxy-dist/lib/galaxy/web/framework/middleware/error.py', line 149 in __call__ app_iter = self.application(environ, sr_checker) File '/mnt/galaxy/data/galaxy/galaxy-dist/eggs/Paste-1.7.5.1-py2.7.egg/paste/recursive.py', line 84 in __call__ return self.application(environ, start_response) File '/mnt/galaxy/data/galaxy/galaxy-dist/lib/galaxy/web/framework/middleware/remoteuser.py', line 107 in __call__ return self.app( environ, start_response ) File '/mnt/galaxy/data/galaxy/galaxy-dist/eggs/Paste-1.7.5.1-py2.7.egg/paste/httpexceptions.py', line 633 in __call__ return self.application(environ, start_response) File '/mnt/galaxy/data/galaxy/galaxy-dist/lib/galaxy/web/framework/base.py', line 132 in __call__ return self.handle_request( environ, start_response ) File '/mnt/galaxy/data/galaxy/galaxy-dist/lib/galaxy/web/framework/base.py', line 190 in handle_request body = method( trans, **kwargs ) File '/mnt/galaxy/data/galaxy/galaxy-dist/lib/galaxy/web/framework/decorators.py', line 87 in decorator return func( self, trans, *args, **kwargs ) File '/mnt/galaxy/data/galaxy/galaxy-dist/lib/galaxy/webapps/galaxy/controllers/admin_toolshed.py', line 1954 in update_to_changeset_revision irmm.generate_metadata_for_changeset_revision() File '/mnt/galaxy/data/galaxy/galaxy-dist/lib/tool_shed/metadata/metadata_generator.py', line 443 in generate_metadata_for_changeset_revision metadata_dict ) File '/mnt/galaxy/data/galaxy/galaxy-dist/lib/tool_shed/metadata/metadata_generator.py', line 648 in generate_tool_metadata for param_name, values in ttb.inputs.iteritems(): AttributeError: 'list' object has no attribute 'iteritems'
participants (1)
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Langhorst, Brad