What are wrappers, how can I use this?
Hi, I installed galaxy locally and want to develop some tools, but I don't know where start. I would know what are wrappers and what I could do with this, and if is possible develop a tool in java. Thanks Ramão
Sure, tools can be written in anything you'd like -- the wrapper you're referring to is just XML that tells galaxy how to interact with your command line tool. Here are some resources that should get you started: http://screencast.g2.bx.psu.edu/toolIntegration/ http://wiki.galaxyproject.org/Admin/Tools/ToolConfigSyntax -Dannon On Wed, Mar 20, 2013 at 11:11 AM, Ramon Tiburski <ramao_tiago_tiburski@hotmail.com> wrote:
Hi,
I installed galaxy locally and want to develop some tools, but I don't know where start. I would know what are wrappers and what I could do with this, and if is possible develop a tool in java.
Thanks
Ramão
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Thank you Dannon
Date: Wed, 20 Mar 2013 11:17:19 -0400 Subject: Re: [galaxy-dev] What are wrappers, how can I use this? From: dannon.baker@gmail.com To: ramao_tiago_tiburski@hotmail.com CC: galaxy-dev@lists.bx.psu.edu
Sure, tools can be written in anything you'd like -- the wrapper you're referring to is just XML that tells galaxy how to interact with your command line tool. Here are some resources that should get you started:
http://screencast.g2.bx.psu.edu/toolIntegration/
http://wiki.galaxyproject.org/Admin/Tools/ToolConfigSyntax
-Dannon
On Wed, Mar 20, 2013 at 11:11 AM, Ramon Tiburski <ramao_tiago_tiburski@hotmail.com> wrote:
Hi,
I installed galaxy locally and want to develop some tools, but I don't know where start. I would know what are wrappers and what I could do with this, and if is possible develop a tool in java.
Thanks
Ramão
___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at:
participants (2)
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Dannon Baker
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Ramon Tiburski