And the corresponding pull request: https://github.com/galaxyproject/tools-devteam/pull/173 The BWA github-repo is newer than what is on the toolshed, right? When do you update the toolshed? Best, Alexander 2015-06-26 22:17 GMT-05:00 Alexander Vowinkel <vowinkel.alexander@gmail.com> :

FOR GOD'S SAKE SEARCH THE ARCHIVE !!!

http://dev.list.galaxyproject.org/Database-Build-td4140140.html

https://github.com/galaxyproject/tools-devteam/blob/master/tools/tophat2/top...

2015-06-26 21:58 GMT-05:00 Alexander Vowinkel < vowinkel.alexander@gmail.com>:

...

Hi,

as many of you probably know by now, I have a tool that creates an output collection by discovering the datasets in this collection like propsed there: [1]

Specifically I have a fastq input with set build information (a ref genome). The output is a collection of fastq files. After I managed to give them the same format like the input (hacky version), I now want them to adopt the build ID. How can I do that?

Thanks, Alexander

[1] https://bitbucket.org/galaxy/galaxy-central/pull-request/634/allow-tools-to-...