Hello Everything seems to be working on my local Galaxy I was talking to my IT guy who did the initial installation and he said that virtualenv may not have been loaded. When he did % yum install python-virtualenv.noarch He got a not found error. He did install mercurial and then completed the Install instructions from www.biocodershub.net/community/guest-post-notes-on-installing-galaxy/<http://www.biocodershub.net/community/guest-post-notes-on-installing-galaxy/> What should we do at this point? Is VirtualEnv dispensible? What should I expect to be broken? Whats the fix? Thank you, Gregory Thyssen, PhD Molecular Biologist Cotton Fiber Bioscience USDA-ARS-Southern Regional Research Center 1100 Robert E Lee Blvd New Orleans, LA 70124 gregory.thyssen@ars.usda.gov 504-286-4280 This electronic message contains information generated by the USDA solely for the intended recipients. Any unauthorized interception of this message or the use or disclosure of the information it contains may violate the law and subject the violator to civil or criminal penalties. If you believe you have received this message in error, please notify the sender and delete the email immediately.
On Feb 6, 2013, at 11:04 AM, Thyssen, Gregory - ARS wrote:
Hello Everything seems to be working on my local Galaxy I was talking to my IT guy who did the initial installation and he said that virtualenv may not have been loaded. When he did % yum install python-virtualenv.noarch He got a not found error.
He did install mercurial and then completed the Install instructions from www.biocodershub.net/community/guest-post-notes-on-installing-galaxy/
What should we do at this point? Is VirtualEnv dispensible? What should I expect to be broken? Whats the fix?
Hi Greg, virtualenv is not required, it just prevents site packages (extra modules not installed with the default python interpreter) from interfering with Galaxy's internally managed dependencies. You can also install virtualenv using pip, easy_install, setup.py, or by just downloading virtualenv.py and running it directly. http://pypi.python.org/pypi/virtualenv --nate
Thank you,
Gregory Thyssen, PhD Molecular Biologist Cotton Fiber Bioscience USDA-ARS-Southern Regional Research Center 1100 Robert E Lee Blvd New Orleans, LA 70124 gregory.thyssen@ars.usda.gov 504-286-4280
This electronic message contains information generated by the USDA solely for the intended recipients. Any unauthorized interception of this message or the use or disclosure of the information it contains may violate the law and subject the violator to civil or criminal penalties. If you believe you have received this message in error, please notify the sender and delete the email immediately. ___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at:
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Nate Coraor -
Thyssen, Gregory - ARS