Build the Galaxy under Cluster
Hi everyone, I want to install my local Galaxy under the Cluster with TORQUE.I have a question about how they work together successfully.In addition,after my local Galaxy and TORQUE install successfully,anything else should I do to the Cluster Galaxy?Thank you very much. shenwiyn
Hi shenwyn, This is a very generic question hard to answer. I can tell you I use Galaxy with the torque 4.1.x branch, maui scheduler and pbs-drmaa. I would suggest you take a look a this[1] wiki page. Please notice as it is mentioned in that page, using libdrmaa.so from torque won't work, I can confirm that. [1]http://wiki.galaxyproject.org/Admin/Config/Performance/Cluster Hope it helps, Carlos On Tue, Jul 2, 2013 at 5:50 AM, shenwiyn <shenwiyn@gmail.com> wrote:
Hi everyone, I want to install my local Galaxy under the Cluster with TORQUE.I have a question about how they work together successfully.In addition,after my local Galaxy and TORQUE install successfully,anything else should I do to the Cluster Galaxy?Thank you very much.
________________________________ shenwiyn
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Hi Carlos, Thank you very much for your help.I use Galaxy with the torque2.5.0,pbs_python for a test.It seems to work successfully ! shenwiyn From: Carlos Borroto Date: 2013-07-10 01:49 To: shenwiyn CC: galaxy-dev@bx.psu.edu Subject: Re: [galaxy-dev] Build the Galaxy under Cluster Hi shenwyn, This is a very generic question hard to answer. I can tell you I use Galaxy with the torque 4.1.x branch, maui scheduler and pbs-drmaa. I would suggest you take a look a this[1] wiki page. Please notice as it is mentioned in that page, using libdrmaa.so from torque won't work, I can confirm that. [1]http://wiki.galaxyproject.org/Admin/Config/Performance/Cluster Hope it helps, Carlos On Tue, Jul 2, 2013 at 5:50 AM, shenwiyn <shenwiyn@gmail.com> wrote:
Hi everyone, I want to install my local Galaxy under the Cluster with TORQUE.I have a question about how they work together successfully.In addition,after my local Galaxy and TORQUE install successfully,anything else should I do to the Cluster Galaxy?Thank you very much.
________________________________ shenwiyn
___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/
Hi Carlos, Thank you very much for your help.I use Galaxy with the torque2.5.0,pbs_python for a test.It seems to work successfully ! shenwiyn From: Carlos Borroto Date: 2013-07-10 01:49 To: shenwiyn CC: galaxy-dev@bx.psu.edu Subject: Re: [galaxy-dev] Build the Galaxy under Cluster Hi shenwyn, This is a very generic question hard to answer. I can tell you I use Galaxy with the torque 4.1.x branch, maui scheduler and pbs-drmaa. I would suggest you take a look a this[1] wiki page. Please notice as it is mentioned in that page, using libdrmaa.so from torque won't work, I can confirm that. [1]http://wiki.galaxyproject.org/Admin/Config/Performance/Cluster Hope it helps, Carlos On Tue, Jul 2, 2013 at 5:50 AM, shenwiyn <shenwiyn@gmail.com> wrote:
Hi everyone, I want to install my local Galaxy under the Cluster with TORQUE.I have a question about how they work together successfully.In addition,after my local Galaxy and TORQUE install successfully,anything else should I do to the Cluster Galaxy?Thank you very much.
________________________________ shenwiyn
___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/
participants (2)
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Carlos Borroto -
shenwiyn