I've been having some problems with some tool dependencies. With most
of them, after a few iterations of uninstall and install, the problem
seems to go away. (I'm not too sure about the reason as I didn't take
good notes while working out the problem to determine what I finally
However, I'm having a problem with samtools that differs from the
samtools problem I had a few months ago (about the system's version of
samtools being out of date).
Both package_samtools_1_1 and package_samtools_1_2 seem to have the
similar problem. For example, with package_samtools_1_2, I see this:
Missing repository dependencies:
package_ncurses_5_9 5e1760c773ba iuc Uninstalled, missing
Installed repository dependencies:
package_zlib_1_2_8 63a4a902cda2 iuc Installed
package_ncurses_5_9 335ebf512407 iuc Installed
I don't quite understand why package_ncurses_5_9 appears twice with
two different versions. Is this a problem with something I did on my
For package_samtools_1_1, package_ncurses_5_9 (5e1760c773ba) is also
missing. But under "Installed tool dependencies", ncurses 5.9 is
Does anyone have an idea of what I could do to resolve this?
As an aside, can someone explain the difference between the owner
"iuc" and "devteam"? I did find https://wiki.galaxyproject.org/IUC
but couldn't find a description of devtools. I have two versions of
package_samtools_0_1_19 installed -- one from iuc and the other from
devteam. Is it fine to leave this alone?