Re: [galaxy-dev] Need your helps about Galaxy
Dear James, Thanks so much for your info. Dumping database is a good idea. But the problem is that the two Galaxy are running on different servers, and the Galaxy versions are very different. Thanks again. Lei Yan Center for Integrative and Translational Genomics UTHSC On Mon, Sep 23, 2013 at 2:37 PM, James Taylor <james@taylorlab.org> wrote:
There is not a simple way to do this. You will need to dump the accounts from your old database and load into the new database. Are they running the same database server?
Please send questions like this to the galaxy-dev mailing list.
-- James Taylor, Associate Professor, Biology/CS, Emory University
On Mon, Sep 23, 2013 at 3:31 PM, Lei Yan <leiyan2000@gmail.com> wrote:
Dear James,
I built a new cloud Galaxy instance today. Would you please tell me how to transfer some given accounts from an old Galaxy to this new one? This is old Galaxy: http://galaxylocal.genenetwork.org:8080/ This is new Galaxy: http://galaxyclass.genenetwork.org/ Thanks a lot.
Lei Yan Center for Integrative and Translational Genomics UTHSC
You have to determine if the old version of galaxy ( galaxylocal.genenetwork.org:8080/) and the new one, if any database changes have occurred between them -- most likely. If not, and you can check, by looking at the hg history changes via the bitbucket website: https://bitbucket.org/galaxy/galaxy-central/src Assuming database has changed, you can upgrade your old galaxy: http://wiki.galaxyproject.org/Admin/Get%20Galaxy#Keep_your_code_up_to_datest... up the instance, upgrade the DB and then dump the database. Perhaps you can get away without upgrading your old galaxy instance by only importing a few tables (such as users) into the new galaxy DB..but I am not sure. Perhaps someone more familiar with the Galaxy DB can comment on this. -- Adam Brenner Computer Science, Undergraduate Student Donald Bren School of Information and Computer Sciences Research Computing Support Office of Information Technology http://www.oit.uci.edu/rcs/ University of California, Irvine www.ics.uci.edu/~aebrenne/ aebrenne@uci.edu On Mon, Sep 23, 2013 at 12:50 PM, Lei Yan <leiyan2000@gmail.com> wrote:
Dear James,
Thanks so much for your info. Dumping database is a good idea. But the problem is that the two Galaxy are running on different servers, and the Galaxy versions are very different. Thanks again.
Lei Yan Center for Integrative and Translational Genomics UTHSC
On Mon, Sep 23, 2013 at 2:37 PM, James Taylor <james@taylorlab.org> wrote:
There is not a simple way to do this. You will need to dump the accounts from your old database and load into the new database. Are they running the same database server?
Please send questions like this to the galaxy-dev mailing list.
-- James Taylor, Associate Professor, Biology/CS, Emory University
On Mon, Sep 23, 2013 at 3:31 PM, Lei Yan <leiyan2000@gmail.com> wrote:
Dear James,
I built a new cloud Galaxy instance today. Would you please tell me how to transfer some given accounts from an old Galaxy to this new one? This is old Galaxy: http://galaxylocal.genenetwork.org:8080/ This is new Galaxy: http://galaxyclass.genenetwork.org/ Thanks a lot.
Lei Yan Center for Integrative and Translational Genomics UTHSC
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participants (2)
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Adam Brenner
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Lei Yan