Hi dev, I was wondering if the following is possible or not. What if I want to build a tool that that uses Perl and R at the same time ? If I had to do it on my local machine I would create a pipeline but wouldn't it be cool if a wrapper could use different languages. Philippe
Hi Philippe: You can just wrap a bash script if you want to to that… or even write a simple pipeline in the xml wrapper with interpreter='bash' or no interpreter at all. I've done that sort of thing before with good results. brad On Nov 20, 2012, at 10:03 PM, Philipe Moncuquet <philippe.mcqt@gmail.com<mailto:philippe.mcqt@gmail.com>> wrote: Hi dev, I was wondering if the following is possible or not. What if I want to build a tool that that uses Perl and R at the same time ? If I had to do it on my local machine I would create a pipeline but wouldn't it be cool if a wrapper could use different languages. Philippe ___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/ -- Brad Langhorst langhorst@neb.com<mailto:langhorst@neb.com>
Hi Brad, Thanks a lot for that tip, will try that. Cheers, Philippe 2012/11/21 Langhorst, Brad <Langhorst@neb.com>
Hi Philippe:
You can just wrap a bash script if you want to to that… or even write a simple pipeline in the xml wrapper with interpreter='bash' or no interpreter at all.
I've done that sort of thing before with good results.
brad On Nov 20, 2012, at 10:03 PM, Philipe Moncuquet <philippe.mcqt@gmail.com> wrote:
Hi dev,
I was wondering if the following is possible or not. What if I want to build a tool that that uses Perl and R at the same time ? If I had to do it on my local machine I would create a pipeline but wouldn't it be cool if a wrapper could use different languages.
Philippe ___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at:
-- Brad Langhorst langhorst@neb.com
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Langhorst, Brad -
Philipe Moncuquet