Only use filepaths and "Copy data into Galaxy?"
Hello everybody, i've got one galaxy server running. The ressource on the wiki are very useful for that purpose, thank you. I've got one question regarding data library when using "upload files from filesystem paths". There is a checkbox, unchecked by default, which prevent file upload into Galaxy. Is there a way to activate this checkbox by default, or to totally remove it on a per library basis ? I'm afraid of data libraries admin forgetting to check this box :D Regards, Jean-Baptiste
Jean-Baptiste Denis wrote:
Hello everybody,
i've got one galaxy server running. The ressource on the wiki are very useful for that purpose, thank you.
I've got one question regarding data library when using "upload files from filesystem paths". There is a checkbox, unchecked by default, which prevent file upload into Galaxy. Is there a way to activate this checkbox by default, or to totally remove it on a per library basis ?
I'm afraid of data libraries admin forgetting to check this box :D
Hi Jean-Baptiste, This is certainly a concern. It's not possible to do this without some hackery, but it's minor hackery. If you're certain you'll never want to have that box unchecked, you can make the following change to templates/library/common/common.py: diff -r 88a118487292 templates/library/common/common.mako --- a/templates/library/common/common.mako Thu Feb 24 19:07:41 2011 -0500 +++ b/templates/library/common/common.mako Fri Feb 25 10:16:51 2011 -0500 @@ -229,7 +229,7 @@ checked = ' checked' else: checked = '' - link_data_only_field = '<input type="checkbox" name="link_data_only" value="No"%s/>No' % checked + link_data_only_field = '<input type="checkbox" name="link_data_only" value="No" checked disabled/>No' %> <label>Copy data into Galaxy?</label> <div class="form-row-input"> Alternatively, you could add 'checked' but not 'disabled' to make it the default but still modifiable. --nate
Regards,
Jean-Baptiste _______________________________________________ To manage your subscriptions to this and other Galaxy lists, please use the interface at:
On 02/25/2011 04:20 PM, Nate Coraor wrote:
Hi Jean-Baptiste,
This is certainly a concern. It's not possible to do this without some hackery, but it's minor hackery. If you're certain you'll never want to have that box unchecked, you can make the following change to templates/library/common/common.py:
- link_data_only_field = '<input type="checkbox" name="link_data_only" value="No"%s/>No' % checked + link_data_only_field = '<input type="checkbox" name="link_data_only" value="No" checked disabled/>No'
Alternatively, you could add 'checked' but not 'disabled' to make it the default but still modifiable.
--nate
Thank your for this very precise answer. I'd rather not change the source by myself, but i'll keep this tip in mind if i need to prevent file upload. jbd
participants (2)
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Jean-Baptiste Denis
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Nate Coraor