history box odd behaviour
Hi All, Since some of the last updates (I guess, since I didn't notice it before) I notice some odd behaviour of the history box when for instance doing BLAST searches on our local galaxy_central (latest version). When I run blastx as output xml it starts running fine (yellow box). I can start new xml processors which are put in queue. All fine. When I press the eye icon on the running blast history box it drops an error in the mid panel that the xml is not there yet (XML-parse error). But than the box changes to green while the blast is still running in the background (checked with htop). The subsequent parsers remain in queue as well. Shouldn't the box remain yellow while processing? Or is something wrong with our datatype configurations...although I cannot remember we have changed anything in there. Thanks Alex
On Feb 13, 2012, at 11:22 AM, Bossers, Alex wrote:
When I press the eye icon on the running blast history box it drops an error in the mid panel that the xml is not there yet (XML-parse error). But than the box changes to green while the blast is still running in the background (checked with htop). The subsequent parsers remain in queue as well.
Shouldn't the box remain yellow while processing? Or is something wrong with our datatype configurations...although I cannot remember we have changed anything in there.
Alex: I noticed this too but didn't take the time to file it as a bug - i think it is a bug. If something is wrong with your setup it's also wrong with mine in the same way. brad Brad Langhorst langhorst@neb.com 978-380-7564
Ok. Just filed a bug report. Alex -----Oorspronkelijk bericht----- Van: Langhorst, Brad [mailto:langhorst@neb.com] Verzonden: maandag 13 februari 2012 17:38 Aan: Bossers, Alex CC: galaxy-dev@lists.bx.psu.edu Onderwerp: Re: [galaxy-dev] history box odd behaviour On Feb 13, 2012, at 11:22 AM, Bossers, Alex wrote:
When I press the eye icon on the running blast history box it drops an error in the mid panel that the xml is not there yet (XML-parse error). But than the box changes to green while the blast is still running in the background (checked with htop). The subsequent parsers remain in queue as well.
Shouldn't the box remain yellow while processing? Or is something wrong with our datatype configurations...although I cannot remember we have changed anything in there.
Alex: I noticed this too but didn't take the time to file it as a bug - i think it is a bug. If something is wrong with your setup it's also wrong with mine in the same way. brad Brad Langhorst langhorst@neb.com 978-380-7564
participants (2)
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Bossers, Alex -
Langhorst, Brad