purging unused datasets and histories
Hi all, I'm a little confused about all the purging scripts.... what I want to do is purge all of the unused datasets and histories and keep the saved or published datasets, histories and workflows and data libraries. Which script do I use to do that? - Nik. -- Nikhil Joshi Bioinformatics Analyst/Programmer UC Davis Bioinformatics Core http://bioinformatics.ucdavis.edu/ najoshi -at- ucdavis -dot- edu 530.752.2698 (w)
Hi Nikhil, Purging datasets is covered in the Galaxy Wiki. http://wiki.g2.bx.psu.edu/Admin/Config/Performance/Purge%20Histories%20and% 20Datasets Basically, there's a bunch of scripts in {GALAXY_HOME}/scripts/cleanup_datasets/ that require running. We've created a single .sh file that executes all these scripts which is then executed itself with a cron job at midnight (and of course can be executed whenever required). Cheers, Graham Dr. Graham Etherington Bioinformatics Support Officer, The Sainsbury Laboratory, Norwich Research Park, Norwich NR4 7UH. UK Tel: +44 (0)1603 450601 On 09/09/2012 11:29, "Nikhil Joshi" <najoshi@ucdavis.edu> wrote:
Hi all,
I'm a little confused about all the purging scripts.... what I want to do is purge all of the unused datasets and histories and keep the saved or published datasets, histories and workflows and data libraries. Which script do I use to do that?
- Nik.
-- Nikhil Joshi Bioinformatics Analyst/Programmer UC Davis Bioinformatics Core http://bioinformatics.ucdavis.edu/ najoshi -at- ucdavis -dot- edu 530.752.2698 (w) ___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at:
participants (2)
-
graham etherington (TSL)
-
Nikhil Joshi