trimest tool cuts the begining of my seq names in the output fasta file
Dear galaxy developers, When I use the EMBOSS tool: trimest<https://main.g2.bx.psu.edu/tool_runner?tool_id=toolshed.g2.bx.psu.edu/repos/devteam/emboss_5/EMBOSS%3A%20trimest102/5.0.0>, Trim poly-A tails off EST sequences , within galaxy The sequences names in the fasta output file comes out without their beginning, for instance:
[Description: logo_50prcnt] Inbar Plaschkes Bioinformatics Core Facility National Institute for Biotechnology Ben-Gurion University of the Negev Beer-Sheva 84105, Israel Building 51, room 323 Email: inbarpl@bgu.ac.il<mailto:inbarpl@bgu.ac.il> Tel: +972-8-6428676 Fax: +972-8-6479035 Web: http://bioinfo.bgu.ac.il<http://bioinfo.bgu.ac.il/>
Hi Inbar If you want to keep the NCBI stile fasta header, you need to change the setting for "Output Sequence File Format:" to "NCBI style FASTA (m)". By default, most EMBOSS tools change the fasta header format to the "EMBOSS" style format. Regards, Hans-Rudolf On 06/16/2013 12:01 PM, Inbar Plaschke wrote:
participants (2)
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Hans-Rudolf Hotz
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Inbar Plaschke