Good afternoon people! I am developing a tool that will have multiple outputs where they have to be data sets in history. Read the tutorial [1] and from it developed my [2] [3] tool, however, have only the .txt output file, the .mol2 files are not showing up in history, someone can tell me why?
[1] https://wiki.galaxyproject.org/Admin/Tools/Multiple%20Output%20Files#Handlin... [2] https://gist.github.com/leobiscassi/8058b6307d388167866a [3] https://gist.github.com/leobiscassi/bc54a7df261c4ee81aa9
Att.
Hi, Did you remember to refresh the history panel after the tool finished? That caught me out multiple times when testing multiple outputs.
Christian ________________________________ From: galaxy-dev [galaxy-dev-bounces@lists.galaxyproject.org] on behalf of Léo Biscassi [leo.biscassi@gmail.com] Sent: Thursday, September 10, 2015 10:01 PM To: galaxy-dev@lists.galaxyproject.org Subject: [galaxy-dev] Tool with multiple outputs.
Good afternoon people! I am developing a tool that will have multiple outputs where they have to be data sets in history. Read the tutorial [1] and from it developed my [2] [3] tool, however, have only the .txt output file, the .mol2 files are not showing up in history, someone can tell me why?
[1] https://wiki.galaxyproject.org/Admin/Tools/Multiple%20Output%20Files#Handlin... [2] https://gist.github.com/leobiscassi/8058b6307d388167866a [3] https://gist.github.com/leobiscassi/bc54a7df261c4ee81aa9
Att. -- Léo Biscassi Facebook - https://pt-br.facebook.com/lbiscassi Linkedin - https://br.linkedin.com/in/leobiscassi Skype - biscassi.leo Twitter - https://twitter.com/leobiscassi
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Hi Christian, Yes, I remembered to refresh tool panel. Thanks for the reply.
Att.
On Fri, Sep 11, 2015 at 5:02 AM, Christian Brenninkmeijer < christian.brenninkmeijer@manchester.ac.uk> wrote:
Hi, Did you remember to refresh the history panel after the tool finished? That caught me out multiple times when testing multiple outputs.
Christian
*From:* galaxy-dev [galaxy-dev-bounces@lists.galaxyproject.org] on behalf of Léo Biscassi [leo.biscassi@gmail.com] *Sent:* Thursday, September 10, 2015 10:01 PM *To:* galaxy-dev@lists.galaxyproject.org *Subject:* [galaxy-dev] Tool with multiple outputs.
Good afternoon people! I am developing a tool that will have multiple outputs where they have to be data sets in history. Read the tutorial [1] and from it developed my [2] [3] tool, however, have only the .txt output file, the .mol2 files are not showing up in history, someone can tell me why?
[1] https://wiki.galaxyproject.org/Admin/Tools/Multiple%20Output%20Files#Handlin... [2] https://gist.github.com/leobiscassi/8058b6307d388167866a [3] https://gist.github.com/leobiscassi/bc54a7df261c4ee81aa9
Att.
*Léo Biscassi* Facebook - https://pt-br.facebook.com/lbiscassi Linkedin - https://br.linkedin.com/in/leobiscassi Skype - biscassi.leo Twitter - https://twitter.com/leobiscassi
Hi Léo,
maybe you can use a dataset collection instead. This is a new way to handle multiple datasets of the same type.
For an example see this tool: https://github.com/bgruening/galaxytools/blob/master/tools/rna_tools/rna_sha...
Cheers, Bjoern
On 10.09.2015 23:01, Léo Biscassi wrote:
Good afternoon people! I am developing a tool that will have multiple outputs where they have to be data sets in history. Read the tutorial [1] and from it developed my [2] [3] tool, however, have only the .txt output file, the .mol2 files are not showing up in history, someone can tell me why?
[1] https://wiki.galaxyproject.org/Admin/Tools/Multiple%20Output%20Files#Handlin... [2] https://gist.github.com/leobiscassi/8058b6307d388167866a [3] https://gist.github.com/leobiscassi/bc54a7df261c4ee81aa9
Att.
*Léo Biscassi* Facebook - https://pt-br.facebook.com/lbiscassi Linkedin - https://br.linkedin.com/in/leobiscassi Skype - biscassi.leo Twitter - https://twitter.com/leobiscassi
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Hi Bjoern, I'll try to use collections and return soon. I could not find the tag of the documentation [1], has any record in the documentation about it?
[1] https://wiki.galaxyproject.org/Admin/Tools/ToolConfigSyntax
Thanks for the reply.
Att.
On Fri, Sep 11, 2015 at 5:42 AM, Bjoern Gruening bjoern.gruening@gmail.com wrote:
Hi Léo,
maybe you can use a dataset collection instead. This is a new way to handle multiple datasets of the same type.
For an example see this tool:
https://github.com/bgruening/galaxytools/blob/master/tools/rna_tools/rna_sha...
Cheers, Bjoern
On 10.09.2015 23:01, Léo Biscassi wrote:
Good afternoon people! I am developing a tool that will have multiple outputs where they have to be data sets in history. Read the tutorial [1] and from it developed my [2] [3] tool, however, have only the .txt output file, the .mol2 files are not showing up in history, someone can tell me why?
[1] https://wiki.galaxyproject.org/Admin/Tools/Multiple%20Output%20Files#Handlin... [2] https://gist.github.com/leobiscassi/8058b6307d388167866a [3] https://gist.github.com/leobiscassi/bc54a7df261c4ee81aa9
Att.
*Léo Biscassi* Facebook - https://pt-br.facebook.com/lbiscassi Linkedin - https://br.linkedin.com/in/leobiscassi Skype - biscassi.leo Twitter - https://twitter.com/leobiscassi
Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: https://lists.galaxyproject.org/
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