manage toolshed repos crashing
When I click on manage installed tool shed repos on the admin screen, I get this error. Any ideas how to debug? -Robert ⇝ UnicodeDecodeError: 'ascii' codec can't decode byte 0xe2 in position 26: ordinal not in range(128) URL: http://su2c-dev.ucsc.edu/admin_toolshed/browse_repositories Module weberror.evalexception.middleware:364 in respond view
app_iter = self.application(environ, detect_start_response) Module paste.recursive:84 in __call__ view return self.application(environ, start_response) Module paste.httpexceptions:633 in __call__ view return self.application(environ, start_response) Module galaxy.web.framework.base:132 in __call__ view return self.handle_request( environ, start_response ) Module galaxy.web.framework.base:190 in handle_request view body = method( trans, **kwargs ) Module galaxy.web.framework:221 in decorator view return func( self, trans, *args, **kwargs ) Module galaxy.webapps.galaxy.controllers.admin_toolshed:151 in browse_repositories view return self.installed_repository_grid( trans, **kwd ) Module galaxy.web.framework.helpers.grids:290 in __call__ view kwargs=kwargs ) Module galaxy.web.framework:991 in fill_template view return self.fill_template_mako( filename, **kwargs ) Module galaxy.web.framework:1006 in fill_template_mako view return template.render( **data ) Module mako.template:296 in render view return runtime._render(self, self.callable_, args, data) Module mako.runtime:660 in _render view **_kwargs_for_callable(callable_, data)) Module mako.runtime:692 in _render_context view _exec_template(inherit, lclcontext, args=args, kwargs=kwargs) Module mako.runtime:718 in _exec_template view callable_(context, *args, **kwargs) Module _base_mako:42 in render_body view __M_writer(unicode(next.body())) Module _grid_base_mako:127 in render_body view __M_writer(unicode(self.grid_body( grid ))) Module _grid_base_mako:747 in render_grid_body view __M_writer(unicode(self.make_grid( grid ))) Module _grid_base_mako:777 in render_make_grid view __M_writer(unicode(self.render_grid_table( grid, show_item_checkboxes ))) Module _grid_base_mako:724 in render_render_grid_table view __M_writer(unicode(render_grid_table_body_contents( grid, show_item_checkboxes ))) Module _grid_base_mako:627 in render_grid_table_body_contents view return render_render_grid_table_body_contents(context,grid,show_item_checkboxes) Module _grid_base_mako:335 in render_render_grid_table_body_contents view value = column.get_value( trans, grid, item ) Module tool_shed.galaxy_install.grids.admin_toolshed_grids:61 in get_value view elif tool_shed_repository.missing_tool_dependencies: Module galaxy.model:3621 in missing_tool_dependencies view for tool_dependency in self.tool_dependencies: Module sqlalchemy.orm.attributes:168 in __get__ view Module sqlalchemy.orm.attributes:453 in get view Module sqlalchemy.orm.strategies:508 in _load_for_state view Module sqlalchemy.orm.strategies:574 in _emit_lazyload view Module sqlalchemy.orm.query:2115 in all view Module sqlalchemy.orm.query:2341 in instances view Module sqlalchemy.engine.base:3204 in fetchall view Module sqlalchemy.engine.base:3350 in _fetchall_impl view UnicodeDecodeError: 'ascii' codec can't decode byte 0xe2 in position 26: ordinal not in range(128)
Hello Robert, Is this still a problem? If so, what version of Galaxy are you running? Greg Von Kuster On Aug 23, 2013, at 1:47 PM, Robert Baertsch <robert.baertsch@gmail.com> wrote:
When I click on manage installed tool shed repos on the admin screen, I get this error.
Any ideas how to debug? -Robert ⇝ UnicodeDecodeError: 'ascii' codec can't decode byte 0xe2 in position 26: ordinal not in range(128) URL: http://su2c-dev.ucsc.edu/admin_toolshed/browse_repositories Module weberror.evalexception.middleware:364 in respond view
app_iter = self.application(environ, detect_start_response) Module paste.recursive:84 in __call__ view return self.application(environ, start_response) Module paste.httpexceptions:633 in __call__ view return self.application(environ, start_response) Module galaxy.web.framework.base:132 in __call__ view return self.handle_request( environ, start_response ) Module galaxy.web.framework.base:190 in handle_request view body = method( trans, **kwargs ) Module galaxy.web.framework:221 in decorator view return func( self, trans, *args, **kwargs ) Module galaxy.webapps.galaxy.controllers.admin_toolshed:151 in browse_repositories view return self.installed_repository_grid( trans, **kwd ) Module galaxy.web.framework.helpers.grids:290 in __call__ view kwargs=kwargs ) Module galaxy.web.framework:991 in fill_template view return self.fill_template_mako( filename, **kwargs ) Module galaxy.web.framework:1006 in fill_template_mako view return template.render( **data ) Module mako.template:296 in render view return runtime._render(self, self.callable_, args, data) Module mako.runtime:660 in _render view **_kwargs_for_callable(callable_, data)) Module mako.runtime:692 in _render_context view _exec_template(inherit, lclcontext, args=args, kwargs=kwargs) Module mako.runtime:718 in _exec_template view callable_(context, *args, **kwargs) Module _base_mako:42 in render_body view __M_writer(unicode(next.body())) Module _grid_base_mako:127 in render_body view __M_writer(unicode(self.grid_body( grid ))) Module _grid_base_mako:747 in render_grid_body view __M_writer(unicode(self.make_grid( grid ))) Module _grid_base_mako:777 in render_make_grid view __M_writer(unicode(self.render_grid_table( grid, show_item_checkboxes ))) Module _grid_base_mako:724 in render_render_grid_table view __M_writer(unicode(render_grid_table_body_contents( grid, show_item_checkboxes ))) Module _grid_base_mako:627 in render_grid_table_body_contents view return render_render_grid_table_body_contents(context,grid,show_item_checkboxes) Module _grid_base_mako:335 in render_render_grid_table_body_contents view value = column.get_value( trans, grid, item ) Module tool_shed.galaxy_install.grids.admin_toolshed_grids:61 in get_value view elif tool_shed_repository.missing_tool_dependencies: Module galaxy.model:3621 in missing_tool_dependencies view for tool_dependency in self.tool_dependencies: Module sqlalchemy.orm.attributes:168 in __get__ view Module sqlalchemy.orm.attributes:453 in get view Module sqlalchemy.orm.strategies:508 in _load_for_state view Module sqlalchemy.orm.strategies:574 in _emit_lazyload view Module sqlalchemy.orm.query:2115 in all view Module sqlalchemy.orm.query:2341 in instances view Module sqlalchemy.engine.base:3204 in fetchall view Module sqlalchemy.engine.base:3350 in _fetchall_impl view UnicodeDecodeError: 'ascii' codec can't decode byte 0xe2 in position 26: ordinal not in range(128)
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participants (2)
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Greg Von Kuster
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Robert Baertsch