Dear Galaxy DevTeam, I have made a few updates to the bowtie_wrappers tool from the Tool Shed, may someone please pull from:
https://bitbucket.org/nsoranzo/bowtie_wrappers/
for the following changes: - Add fields for --nofw and --norc options also for single-end reads - Remove field for --cutoff option of bowtie-build - Do not show fields for --best and --strata options for paired-end reads - Add control to choose between -a and -k options - Show fields for --pairtries and --maxbts options only when noTryHard - Add control to choose between Maq- and SOAP-like alignment - Add range validators to all integer parameters
I am not sure this mailing list is the correct place for such pull requests, if not please advise me!
Thanks, Nicola
galaxy-dev@lists.galaxyproject.org