Hi Nikolay,
I set it to 50000 and the request goes through, but I still only see an empty list for
"Monitoring installing tool shed repositories".
I suppose something is wrong with my existing version of cuffdiff, since I can't
update or repair it also. I had issues with galaxy messing up entries in the tool install
database before. Maybe the existing entry is screwing up the installation of the new
version.
Best regards,
Sarah
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Sarah Diehl
HPC System Administrator
UNIVERSITÉ DU LUXEMBOURG
LUXEMBOURG CENTRE FOR SYSTEMS BIOMEDICINE
Campus Belval | Biotech II
6, avenue du Swing
L-4371 Belvaux
T +352 46 66 44 5360
sarah.diehl@uni.lu<mailto:sarah.diehl@uni.lu>
http://lcsb.uni.lu<http://lcsb.uni.lu/>
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From: Nikolay Aleksandrov Vazov
<n.a.vazov@usit.uio.no<mailto:n.a.vazov@usit.uio.no>>
Date: Thursday 21 July 2016 13:36
To: Sarah DIEHL <sarah.diehl@uni.lu<mailto:sarah.diehl@uni.lu>>
Subject: Re: errors when updating tools
I am not very familiar with ToolShed and I don't know what
"encoded_repo_info_dicts" actually does. Do you remember what your previous
values were?
The apache option worked for me. Try to set 50000 instead.
Nikolay
===============
Nikolay Vazov, PhD
Department for Research Computing, University of Oslo
________________________________
From: Sarah DIEHL <sarah.diehl@uni.lu<mailto:sarah.diehl@uni.lu>>
Sent: 21 July 2016 13:05
To: Nikolay Aleksandrov Vazov;
galaxy-dev@lists.galaxyproject.org<mailto:galaxy-dev@lists.galaxyproject.org>
Subject: Re: errors when updating tools
Hi Nikolay,
thanks a lot for the hint. I looked up the apache option and everywhere it says that
something is wrong if you have to change that ;-). I did it anyway and I can see in the
logs that a very long request appears that doesn't look right (see attached file) and
afterwards I just get an empty page.