Hi, We put online the pdf file about Galaxy and iRODS connexion on our site. You can find it here : https://urgi.versailles.inra.fr/Tools/Galaxy in Admin corner section. I also send the form for Galaxy Community Log Board. If iRODS team wants to host the file, you can do it or just add a link to our webpage. Thank you :) Regards, Mikael LOAEC Systems and Networks Administrator URGI INRA On 09/03/2016 18:47, Dan Bedard wrote: > The iRODS dev team is certainly interested in how people are using and want to use iRODS with Galaxy. Mikael, we would be happy to host the PDF and/or a guest blog post about making it work. And we can provide some assistance if there are difficulties on the iRODS side of this. > > Cheers, > Dan Bedard > > — > Dan Bedard > Executive Director > iRODS Consortium > > mobile: 1-919-346-3262 > email: danb(a)renci.org > twitter: @DataDanB > > iRODS User Group Meeting 2016 > June 7-9 -- Chapel Hill, NC -- https://irods.org/ugm2016 > > >> Message: 2 >> Date: Wed, 9 Mar 2016 01:24:24 +0000 >> From: "Kandalaft, Iyad" <Iyad.Kandalaft(a)AGR.GC.CA&gt; >> To: James Taylor <james(a)bx.psu.edu&gt;, Mohamed Kassam >> <k.mamoud(a)gmail.com&gt; >> Cc: &quot;galaxy-dev(a)lists.galaxyproject.org&quot; >> <galaxy-dev(a)lists.galaxyproject.org&gt; >> Subject: Re: [galaxy-dev] iRODS >> Message-ID: >> <CA1994D763C7444CB37EFC823D43C3824933F672(a)ONOTTAXES1.AGR.GC.CA&gt; >> Content-Type: text/plain; charset="us-ascii" >> >> We were considering implementing data pull/push tools for Galaxy-iRODS integration but we haven't started work on that. >> I recall that the Galaxy team looked at backing Galaxy with iRODS but moved away from the idea. There was a trello card with that information. >> >> >> Iyad Kandalaft >> Bioinformatics Systems Developer >> Microbial Biodiversity Bioinformatics >> Science & Technology Branch >> Agriculture & Agri-Food Canada >> Iyad.Kandalaft(a)agr.gc.ca | (613) 759-1228 >> >> ________________________________________ >> From: galaxy-dev [galaxy-dev-bounces(a)lists.galaxyproject.org] on behalf of James Taylor [james(a)bx.psu.edu] >> Sent: March 8, 2016 10:09 AM >> To: Mohamed Kassam >> Cc: galaxy-dev(a)lists.galaxyproject.org >> Subject: Re: [galaxy-dev] iRODS >> >> Mohamed, >> >> We implemented but never deployed the iRODS object store, so I suspect >> it has not been tested much. If anyone out there is using it please >> let us know. >> >> On Mon, Mar 7, 2016 at 10:30 AM, Mohamed Kassam <k.mamoud(a)gmail.com&gt; wrote: >>> Dear all, >>> I would like to use our interlan iRODs to pull data. >>> I searched and i find that there is an object store for that. >>> How it works ? DO I need to configure something else ? >>> >>> Thanks in advance, >>> >>> >>> Mohamed >>> >>> ___________________________________________________________ >>> Please keep all replies on the list by using "reply all" >>> in your mail client. To manage your subscriptions to this >>> and other Galaxy lists, please use the interface at: >>> https://lists.galaxyproject.org/ >>> >>> To search Galaxy mailing lists use the unified search at: >>> http://galaxyproject.org/search/mailinglists/ >> ___________________________________________________________ >> Please keep all replies on the list by using "reply all" >> in your mail client. To manage your subscriptions to this >> and other Galaxy lists, please use the interface at: >> https://lists.galaxyproject.org/ >> >> To search Galaxy mailing lists use the unified search at: >> http://galaxyproject.org/search/mailinglists/ >> >> >> ------------------------------ >> >> Message: 3 >> Date: Wed, 9 Mar 2016 12:01:38 +0100 >> From: Mikael Loaec <mikael.loaec(a)versailles.inra.fr&gt; >> To: galaxy-dev(a)lists.galaxyproject.org >> Cc: Olivier Inizan <Olivier.Inizan(a)versailles.inra.fr&gt; >> Subject: [galaxy-dev] iRODS >> Message-ID: <56E00292.5070604(a)versailles.inra.fr&gt; >> Content-Type: text/plain; charset=utf-8 >> >> Hi, >> >> @URGI, we have sucessfully tested connexion of galaxy instance with an >> iRODS. >> We have a pdf doc 67ko) explaining how we implement it if you want, but >> don't know if i can send attachement on this mailinglist ? >> >> We (URGI) are also very interresting in data pull/push tools for >> Galaxy-iRODS integration. Let us know when you will begin working on it. >> >> Regards, >> >> Mikael LOAEC >> Systems and Networks Administrator >> URGI INRA >> >> >> ------------------------------ >> >> Message: 4 >> Date: Wed, 9 Mar 2016 12:43:36 +0100 >> From: Mohamed Kassam <k.mamoud(a)gmail.com&gt; >> To: Mikael Loaec <mikael.loaec(a)versailles.inra.fr&gt; >> Cc: galaxy-dev(a)lists.galaxyproject.org, Olivier Inizan >> <Olivier.Inizan(a)versailles.inra.fr&gt; >> Subject: Re: [galaxy-dev] iRODS >> Message-ID: >> <CAJrYSO8e2dfb2JjdAqCB9CFkg= NELV8vrBCrwnQQ-FpKjU6Pkw(a)mail.gmail.com&gt; >> Content-Type: text/plain; charset="utf-8" >> >> Thank you for your message, >> >> I sent to you Mikael an email if you can semd your pdf. >> >> It is a good idea to see if in The galaxy dev team they can integrate iRODS >> for the next release. >> >> Best regards, >> >> Mohamed >> >> 2016-03-09 12:01 GMT+01:00 Mikael Loaec < mikael.loaec(a)versailles.inra.fr&gt;: >> >>> Hi, >>> >>> @URGI, we have sucessfully tested connexion of galaxy instance with an >>> iRODS. >>> We have a pdf doc 67ko) explaining how we implement it if you want, but >>> don't know if i can send attachement on this mailinglist ? >>> >>> We (URGI) are also very interresting in data pull/push tools for >>> Galaxy-iRODS integration. Let us know when you will begin working on it. >>> >>> Regards, >>> >>> Mikael LOAEC >>> Systems and Networks Administrator >>> URGI INRA >>> ___________________________________________________________ >>> Please keep all replies on the list by using "reply all" >>> in your mail client. To manage your subscriptions to this >>> and other Galaxy lists, please use the interface at: >>> https://lists.galaxyproject.org/ >>> >>> To search Galaxy mailing lists use the unified search at: >>> http://galaxyproject.org/search/mailinglists/ >>