Hi Nathan, I am going to move your question over to the galaxy-dev@bx.psu.edu mailing list to see if anyone in the development community has feedback. Galaxy-user is mostly a Q & A list for scientists working with tools on the main Galaxy public server. http://wiki.g2.bx.psu.edu/Mailing%20Lists#The_lists Thanks! Jen Galaxy team On 2/3/12 7:21 AM, Nathan Panike wrote:

Has anyone had success using the Condor scheduling system with the following software?

RSEM ChimeraScan GATK BreakDancer VariationHunter

Thanks,

Nathan Panike, nwp@cs.wisc.edu UW-Madison Center for High Throughput Computing ___________________________________________________________ The Galaxy User list should be used for the discussion of Galaxy analysis and other features on the public server at usegalaxy.org. Please keep all replies on the list by using "reply all" in your mail client. For discussion of local Galaxy instances and the Galaxy source code, please use the Galaxy Development list:

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