On Feb 12, 2013, at 10:49 AM, Gaueko Erge wrote:

Hi,

I have followed, carefully, the instructions posted in:http://wiki.galaxyproject.org/Admin/Data%20Integration

Yet, despite my best efforts when I get, say all exons from hg19 build and try to their fetch sequences, galaxy tells me that the sequences for hg19 are not there

I find this surprising because I have downloaded:

rsync://datacache.g2.bx.psu.edu/indexes/ rsync://hgdownload.cse.ucsc.edu/gbdb/ rsync://hgdownload.cse.ucsc.edu/goldenPath/vicPac1/bigZips

databases and added the correct paths to the 'alignseq.loc' file

Hi Gaueko, It'd be helpful if you could provide us with the entry from your alignseq.loc file. Also, you may want to verify that your alignseq.loc contains only tabs between the fields, not spaces. --nate

Any ideas will be appreciated

Thanks

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