Hi, I upload files which then automatically call execute_workflow.py. The files background turn to green , but to see the workflow running on the GUI I need to refresh the display. Does anyone know how I can add a refresh command to the code, and where in the code to add it. Thanks Neil
So you have a galaxy window open and as you upload files via the API, new datasets do appear automatically without refreshing the history. These datasets, however, are in the wrong state and don't update? -Dannon On Thu, May 23, 2013 at 12:01 AM, <Neil.Burdett@csiro.au> wrote:
Hi,****
I upload files which then automatically call execute_workflow.py. The files background turn to green , but to see the workflow running on the GUI I need to refresh the display. Does anyone know how I can add a refresh command to the code, and where in the code to add it.****
** **
Thanks****
Neil****
___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/
Hi Dannon, I've modified the end of ~/galaxy-dist/tools/data_source/upload.py so that once the file has been uploaded, it calls a script which gets the current history file ID, workflow ID, ID if dataset uploaded and then calls execute_workflow.py with these inputs So the dataset appears on the history fine and turns from grey->yellow->green without issue. However, to see the workflow executing, on the history panel, I need to click on the refresh button. I was hoping someone would know how I could call the refresh method in the code so the workflow automatically shows without needing to click on the refresh icon Thanks Neil From: Dannon Baker [mailto:dannon.baker@gmail.com] Sent: Wednesday, 29 May 2013 2:06 AM To: Burdett, Neil (ICT Centre, Herston - RBWH) Cc: Galaxy Dev Subject: Re: [galaxy-dev] Workflow refresh So you have a galaxy window open and as you upload files via the API, new datasets do appear automatically without refreshing the history. These datasets, however, are in the wrong state and don't update? -Dannon On Thu, May 23, 2013 at 12:01 AM, <Neil.Burdett@csiro.au<mailto:Neil.Burdett@csiro.au>> wrote: Hi, I upload files which then automatically call execute_workflow.py. The files background turn to green , but to see the workflow running on the GUI I need to refresh the display. Does anyone know how I can add a refresh command to the code, and where in the code to add it. Thanks Neil ___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/ To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/
participants (2)
-
Dannon Baker
-
Neil.Burdett@csiro.au