On Feb 2, 2012, at 12:23 PM, Shantanu Pavgi wrote:

The job scripts generated by galaxy contain following code. I was wondering what's the purpose of if-block after setting 'GALAXY_LIB="None"' assignment.

{{{ GALAXY_LIB="None" if [ "$GALAXY_LIB" != "None" ]; then if [ -n "$PYTHONPATH" ]; then PYTHONPATH="$GALAXY_LIB:$PYTHONPATH" else PYTHONPATH="$GALAXY_LIB" fi export PYTHONPATH fi

}}}

Hi Shantanu, That file is a template and GALAXY_LIB="%s" is filled with the value of job_wrapper.galaxy_lib_dir. It won't always be None. --nate

-- Shantanu ___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at:

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