Hello Ed,

This one was tough to track down, but I believe I have it resolved. On Linux, the mercurial api's call to commit seems to bump into issues intermittently, throws an exception, and rolls back the transaction. Although I can reproduce it on Linux, I cannot produce this behavior on a Mac. I've added exception handling in the latest version of the tool shed that uses a different approach to committing the changes whenever the intermittent exception is thrown.

Thanks for finding this issue, and please let me know if you bump into any problems in the future.

Greg Von Kuster

On Jul 15, 2011, at 1:20 PM, Edward Kirton wrote:

it was for an upload of MUSCLE. the error only occurred when i uploaded the XML file uncompressed. it worked fine later when i put it in a tarball.

On Fri, Jul 15, 2011 at 6:48 AM, Greg Von Kuster greg@bx.psu.edu wrote: Hello Ed,

Looking at the logs, I see that you uploaded to your Roche454 tool suite repo. Is that correct? I don't see any exceptions in the logs, so not sure what happened. Are you still having this issue?

Thanks,

Greg Von Kuster

On Jul 14, 2011, at 9:32 PM, Edward Kirton wrote:

...

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Greg Von Kuster Galaxy Development Team greg@bx.psu.edu

Greg Von Kuster Galaxy Development Team greg@bx.psu.edu