Hi,
I'm newbie in Galaxy. In fact, this is my first post.
I'd like to create a web-interface to run a C program. It is necessary a config file which is used as input to this program. Therefore, the values of parameters are informed by user through this web-interface. Its output is some files.
I searched in Galaxy wiki some examples or tutorials. However, I didn't find anything that helped me. I'm confused in what I can do.
Could you help me showing where I can find specific materials?
Best regards,
-- Rodrigo Antonio Faccioli Ph.D Student in Electrical Engineering University of Sao Paulo - USP Engineering School of Sao Carlos - EESC Department of Electrical Engineering - SEL Intelligent System in Structural Bioinformatics http://laips.sel.eesc.usp.br Phone: 55 (16) 3373-8739 Curriculum Lattes - http://lattes.cnpq.br/1025157978990218 Public Profile - http://br.linkedin.com/pub/rodrigo-faccioli/7/589/a5 Personal Blogg - http://rodrigofaccioli.blogspot.com/
Hi Rodrigo,
You can try this tutorial: http://wiki.g2.bx.psu.edu/Admin/Tools/Add%20Tool%20Tutorial
Although I dont do c/c++ development myself, you might want to want to make sure that the c/c++ tools you create have been compiled for the platform you are working on, especially when you switch from a local instance to a serve instance.
Best Tomithy
On Thu, Jul 26, 2012 at 8:08 AM, Rodrigo Faccioli < rodrigo.faccioli@gmail.com> wrote:
Hi,
I'm newbie in Galaxy. In fact, this is my first post.
I'd like to create a web-interface to run a C program. It is necessary a config file which is used as input to this program. Therefore, the values of parameters are informed by user through this web-interface. Its output is some files.
I searched in Galaxy wiki some examples or tutorials. However, I didn't find anything that helped me. I'm confused in what I can do.
Could you help me showing where I can find specific materials?
Best regards,
-- Rodrigo Antonio Faccioli Ph.D Student in Electrical Engineering University of Sao Paulo - USP Engineering School of Sao Carlos - EESC Department of Electrical Engineering - SEL Intelligent System in Structural Bioinformatics http://laips.sel.eesc.usp.br Phone: 55 (16) 3373-8739 Curriculum Lattes - http://lattes.cnpq.br/1025157978990218 Public Profile - http://br.linkedin.com/pub/rodrigo-faccioli/7/589/a5 Personal Blogg - http://rodrigofaccioli.blogspot.com/
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Hi Tomithy,
Thank you so much your answer. I'll study this link.
Best regards,
-- Rodrigo Antonio Faccioli Ph.D Student in Electrical Engineering University of Sao Paulo - USP Engineering School of Sao Carlos - EESC Department of Electrical Engineering - SEL Intelligent System in Structural Bioinformatics http://laips.sel.eesc.usp.br Phone: 55 (16) 3373-8739 Curriculum Lattes - http://lattes.cnpq.br/1025157978990218 Public Profile - http://br.linkedin.com/pub/rodrigo-faccioli/7/589/a5 Personal Blogg - http://rodrigofaccioli.blogspot.com/
On Thu, Jul 26, 2012 at 12:11 AM, Tomithy Too tomithy.too@gmail.com wrote:
Hi Rodrigo,
You can try this tutorial: http://wiki.g2.bx.psu.edu/Admin/Tools/Add%20Tool%20Tutorial
Although I dont do c/c++ development myself, you might want to want to make sure that the c/c++ tools you create have been compiled for the platform you are working on, especially when you switch from a local instance to a serve instance.
Best Tomithy
On Thu, Jul 26, 2012 at 8:08 AM, Rodrigo Faccioli < rodrigo.faccioli@gmail.com> wrote:
Hi,
I'm newbie in Galaxy. In fact, this is my first post.
I'd like to create a web-interface to run a C program. It is necessary a config file which is used as input to this program. Therefore, the values of parameters are informed by user through this web-interface. Its output is some files.
I searched in Galaxy wiki some examples or tutorials. However, I didn't find anything that helped me. I'm confused in what I can do.
Could you help me showing where I can find specific materials?
Best regards,
-- Rodrigo Antonio Faccioli Ph.D Student in Electrical Engineering University of Sao Paulo - USP Engineering School of Sao Carlos - EESC Department of Electrical Engineering - SEL Intelligent System in Structural Bioinformatics http://laips.sel.eesc.usp.br Phone: 55 (16) 3373-8739 Curriculum Lattes - http://lattes.cnpq.br/1025157978990218 Public Profile - http://br.linkedin.com/pub/rodrigo-faccioli/7/589/a5 Personal Blogg - http://rodrigofaccioli.blogspot.com/
Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at:
Quoting Rodrigo Faccioli (2012-07-26 00:08:23)
I'd like to create a web-interface to run a C program. It is necessary a config file which is used as input to this program. Therefore, the values
You probably want to look at the <configfiles> element for the tool configs:
http://wiki.g2.bx.psu.edu/Admin/Tools/Tool%20Config%20Syntax#A.3Cconfigfiles...
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