You're welcome!
On Wed, Jun 22, 2016 at 4:49 PM Ryan G <ngsbioinformatics(a)gmail.com> wrote:
That fixes it. Thanks!
On Tue, Jun 14, 2016 at 10:33 AM, Dannon Baker <dannon.baker(a)gmail.com>
wrote:
> Ok, so it's definitely the column limit that's causing the unexpected
> style-less display. This currently isn't configurable per-galaxy (the plan
> was to add more appropriate displays for many-columned files), but here's a
> quick gist to show you how you might tweak this locally:
>
>
https://gist.github.com/dannon/f67cccd16f9e8c8776a0032b11d1c5c7
>
> This would be really easy to turn into an app configuration setting in
> galaxy.ini if it seems like something folks would want though I opted not
> to do so originally to avoid configuration bloat for what seemed like a
> very niche case.
>
> On Tue, Jun 14, 2016 at 10:23 AM Ryan G <ngsbioinformatics(a)gmail.com>
> wrote:
>
>> No, it happens to all output from this particular tool.
>>
>> I do see a javascript warning in the console, 'The character encoding of
>> a framed document was not declared. The document may appear different if
>> view without the document framing it.'
>>
>> The file does have 64 columns in it. Is there a way to change Galaxy's
>> default from 50 to something more?
>>
>>
>>
>> On Tue, May 31, 2016 at 8:17 AM, Carl Eberhard <carlfeberhard(a)gmail.com>
>> wrote:
>>
>>> Strange. Alright, a few questions then:
>>>
>>> * Is this the only file that this happens to? Do other outputs from
>>> this tool produce the same sort of error?
>>> * Do you see any javascript errors in the console when attempting the
>>> viewing? (how to here:
http://webmasters.stackexchange.com/a/77337)
>>>
>>> On Fri, May 27, 2016 at 12:42 PM, Ryan G <ngsbioinformatics(a)gmail.com>
>>> wrote:
>>>
>>>> The format is listed as tabular when I view details.
>>>>
>>>> In fact, in the preview window in the History Pane, it recognizes
>>>> there are columns and that the data is in fact tabular, but when
>>>> displaying, this isn't the case.
>>>>
>>>>
>>>>
>>>> On Tue, May 24, 2016 at 4:20 PM, Carl Eberhard <
>>>> carlfeberhard(a)gmail.com> wrote:
>>>>
>>>>> Ok - if it's not zebra striped and it's word wrapping, then
it's
>>>>> somehow not displaying as tabular - you're correct.
>>>>>
>>>>> If you click on the 'View details' button of that dataset
(the 'i'
>>>>> with the circle around it shown when the dataset is expanded in the
right
>>>>> hand side of the 'Analyze Data' page), what does it list the
'Format' as?
>>>>> 'tabular'? (This is also listed as 'Format' in the
expanded view itself).
>>>>>
>>>>> On Mon, May 23, 2016 at 5:33 PM, Ryan G
<ngsbioinformatics(a)gmail.com>
>>>>> wrote:
>>>>>
>>>>>> Odd because I have another tabular file that is displayed with
every
>>>>>> other line highlighted and there is not word-wrapping on the
file. However
>>>>>> the file that has the type tabular and displayed as text is
word-wrapped
>>>>>> with no lines highlighted. I suspect its not actually recognized
as
>>>>>> tabular or is being overridden where.
>>>>>>
>>>>>>
>>>>>> On Thu, Nov 12, 2015 at 10:23 AM, Carl Eberhard <
>>>>>> carlfeberhard(a)gmail.com> wrote:
>>>>>>
>>>>>>> Hi, Ryan
>>>>>>>
>>>>>>> Galaxy displays tabular data in the browser using a
<table> tag. It
>>>>>>> *sounds like* the behavior you see (columns losing space
between one
>>>>>>> another when narrowing the window and getting more space as
you expand the
>>>>>>> window) would reflect that.
>>>>>>>
>>>>>>> Carl
>>>>>>>
>>>>>>> On Wed, Oct 28, 2015 at 1:23 PM, Ryan G <
>>>>>>> ngsbioinformatics(a)gmail.com> wrote:
>>>>>>>
>>>>>>>> The file is an output from a tool and in the tool's
xml, its
>>>>>>>> format is tabular.
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> On Tue, Oct 27, 2015 at 3:43 AM, Björn Grüning <
>>>>>>>> bjoern.gruening(a)gmail.com> wrote:
>>>>>>>>
>>>>>>>>> Hi Ryan,
>>>>>>>>>
>>>>>>>>> is it recognised as 'tabular'?
>>>>>>>>>
>>>>>>>>> Ciao,
>>>>>>>>> Bjoern
>>>>>>>>>
>>>>>>>>> Am 27.10.2015 um 04:42 schrieb Ryan G:
>>>>>>>>> > Hi - I have a tools that generates a
tab-delimited text file as
>>>>>>>>> output.
>>>>>>>>> > when I click the eye icon to view the data, all
the fields are
>>>>>>>>> compressed
>>>>>>>>> > as if there were no tabs. If I expand the
history view, the
>>>>>>>>> little preview
>>>>>>>>> > window shows the contents as tabbed. I've
verified that the
>>>>>>>>> spaces are
>>>>>>>>> > indeed '\t' tab characters. Why would
Galaxy not display this
>>>>>>>>> file as a
>>>>>>>>> > tab-delimited file?
>>>>>>>>> >
>>>>>>>>> >
>>>>>>>>> >
>>>>>>>>> >
___________________________________________________________
>>>>>>>>> > Please keep all replies on the list by using
"reply all"
>>>>>>>>> > in your mail client. To manage your
subscriptions to this
>>>>>>>>> > and other Galaxy lists, please use the interface
at:
>>>>>>>>> >
https://lists.galaxyproject.org/
>>>>>>>>> >
>>>>>>>>> > To search Galaxy mailing lists use the unified
search at:
>>>>>>>>> >
http://galaxyproject.org/search/mailinglists/
>>>>>>>>> >
>>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
___________________________________________________________
>>>>>>>> Please keep all replies on the list by using "reply
all"
>>>>>>>> in your mail client. To manage your subscriptions to
this
>>>>>>>> and other Galaxy lists, please use the interface at:
>>>>>>>>
https://lists.galaxyproject.org/
>>>>>>>>
>>>>>>>> To search Galaxy mailing lists use the unified search
at:
>>>>>>>>
http://galaxyproject.org/search/mailinglists/
>>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>
>>>>>
>>>>
>>>
>> ___________________________________________________________
>> Please keep all replies on the list by using "reply all"
>> in your mail client. To manage your subscriptions to this
>> and other Galaxy lists, please use the interface at:
>>
https://lists.galaxyproject.org/
>>
>> To search Galaxy mailing lists use the unified search at:
>>
http://galaxyproject.org/search/mailinglists/
>
>