The R modules (Rg Data, etc.) are not working on my local Galaxy install in Mac OS X Snow Leopard (their UI's don't even appear when clicking on the tool link): Mac OS X = 10.6.2 Galaxy = galaxy-82b63d47a0d8 R = 2.10.0 Python = 2.6 I believe the problem is with Rpy (I cannot get it to build, or install to a working state). Anybody running Galaxy with its R tools under Snow Leopard? Dean A. Snyder Senior Programmer/Analyst Center for Inherited Disease Research (CIDR) Johns Hopkins School of Medicine Bayview Research Campus 333 Cassell Dr, Triad Bldg, Suite 2000 Baltimore, MD 21224 www.cidr.jhmi.edu cell:717 668-3048 office:410-550-4629
Hello Dean, Thanks for reportin gthis - I've opened the following ticket for this issue. You can "follow" the ticket in bitbucket if you want. http://bitbucket.org/galaxy/galaxy-central/issue/249/r-not-working-on- snow-leopard On Nov 24, 2009, at 2:07 PM, Dean Snyder wrote:
The R modules (Rg Data, etc.) are not working on my local Galaxy install in Mac OS X Snow Leopard (their UI's don't even appear when clicking on the tool link):
Mac OS X = 10.6.2 Galaxy = galaxy-82b63d47a0d8 R = 2.10.0 Python = 2.6
I believe the problem is with Rpy (I cannot get it to build, or install to a working state).
Anybody running Galaxy with its R tools under Snow Leopard?
Dean A. Snyder Senior Programmer/Analyst Center for Inherited Disease Research (CIDR) Johns Hopkins School of Medicine Bayview Research Campus 333 Cassell Dr, Triad Bldg, Suite 2000 Baltimore, MD 21224 www.cidr.jhmi.edu cell:717 668-3048 office:410-550-4629
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Greg Von Kuster Galaxy Development Team greg@bx.psu.edu
Dean Snyder wrote:
The R modules (Rg Data, etc.) are not working on my local Galaxy install in Mac OS X Snow Leopard (their UI's don't even appear when clicking on the tool link):
Mac OS X = 10.6.2 Galaxy = galaxy-82b63d47a0d8 R = 2.10.0 Python = 2.6
I believe the problem is with Rpy (I cannot get it to build, or install to a working state).
Anybody running Galaxy with its R tools under Snow Leopard?
Hi Dean, Could you provide some details on what the errors are when you attempt to build RPy? --nate
participants (3)
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Dean Snyder
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Greg Von Kuster
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Nate Coraor