details: http://www.bx.psu.edu/hg/galaxy/rev/a0a5be919102 changeset: 2819:a0a5be919102 user: Kelly Vincent <kpvincent@bx.psu.edu> date: Fri Oct 02 09:37:57 2009 -0400 description: Corrected Samtools Pileup tool to accept only BAM files as input, instead of also SAM 1 file(s) affected in this change: tools/samtools/sam_pileup.xml diffs (12 lines): diff -r 72020a46127e -r a0a5be919102 tools/samtools/sam_pileup.xml --- a/tools/samtools/sam_pileup.xml Fri Oct 02 09:36:07 2009 -0400 +++ b/tools/samtools/sam_pileup.xml Fri Oct 02 09:37:57 2009 -0400 @@ -42,7 +42,7 @@ </param> </when> <when value="history"> - <param name="input1" type="data" format="sam, bam" label="Select the BAM file to generate the pileup file for" /> + <param name="input1" type="data" format="bam" label="Select the BAM file to generate the pileup file for" /> <param name="ownFile" type="data" format="fasta" metadata_name="dbkey" label="Select a reference genome" /> </when> </conditional>