I recently learned that Data Libraries are NOT counted in the user quota… I think that probably accounts for the space disparity i’m seeing, though I don’t know how to check how much space is used in libraries. Is it worth adding a trello card to see about adding these counts to the quota system. Or maybe there is some other way to avoid huge data libraries? Or some way to archive old data libraries? Thanks for any advice... brad

On Dec 17, 2014, at 1:49 PM, Dooley, Damion <Damion.Dooley@bccdc.ca> wrote:

Just a small question about this - you have purge_datasets.sh, and then delete_datasets.sh . Shouldn't it be the other way around, since purging only works on the deleted datasets? (I realise this doesn't address your main issue, since running it twice should have maximized free space.)

Damion

On 12/17/2014 01:05 PM, Langhorst, Brad wrote:

...

My glaaxy user data area is using 40T

But the repots server only show usage of about 16T…

Im nearly out of space and I’m not sure how to resolve the disparity. I have run the clearnup_datasets.py and other

I’m running mainenance scripts like this:

#!/bin/sh

echo 'running galaxy maintenace scripts' #runs galaxy maintenance scripts GALAXY_PATH=/mnt/galaxy/data/galaxy/galaxy-dist SCRIPT_PATH=${GALAXY_PATH}/scripts/cleanup_datasets sh ${SCRIPT_PATH}/delete_userless_histories.sh sh ${SCRIPT_PATH}/purge_histories.sh sh ${SCRIPT_PATH}/purge_libraries.sh sh ${SCRIPT_PATH}/purge_folders.sh sh ${SCRIPT_PATH}/purge_datasets.sh sh ${SCRIPT_PATH}/delete_datasets.sh

-- Brad Langhorst, Ph.D. Applications and Product Development Scientist

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