Dear Galaxy Dev Team, We upgraded our Galaxy instance to the git repository from mercurial old Galaxy-dist to Galaxy. When running the sh manage_db.sh -c ./config/galaxy.ini upgrade we get the following error. Can you explain this error and more importantly how to correct the problem> Thanks, Bob -bash-4.2$ sh manage_db.sh -c ./config/galaxy.ini upgradeTraceback (most recent call last): File "./scripts/manage_db.py", line 33, in <module> invoke_migrate_main() File "./scripts/manage_db.py", line 30, in invoke_migrate_main main( repository=repo, url=db_url ) File "/shelter/rppa/galaxy/eggs/sqlalchemy_migrate-0.9.6-py2.7.egg/migrate/versioning/shell.py", line 209, in main ret = command_func(**kwargs) File "/shelter/rppa/galaxy/eggs/sqlalchemy_migrate-0.9.6-py2.7.egg/migrate/versioning/api.py", line 186, in upgrade return _migrate(url, repository, version, upgrade=True, err=err, **opts) File "<string>", line 2, in _migrate File "/shelter/rppa/galaxy/eggs/sqlalchemy_migrate-0.9.6-py2.7.egg/migrate/versioning/util/__init__.py", line 160, in with_engine return f(*a, **kw) File "/shelter/rppa/galaxy/eggs/sqlalchemy_migrate-0.9.6-py2.7.egg/migrate/versioning/api.py", line 342, in _migrate schema = ControlledSchema(engine, repository) File "/shelter/rppa/galaxy/eggs/sqlalchemy_migrate-0.9.6-py2.7.egg/migrate/versioning/schema.py", line 33, in __init__ self.load() File "/shelter/rppa/galaxy/eggs/sqlalchemy_migrate-0.9.6-py2.7.egg/migrate/versioning/schema.py", line 54, in load exceptions.DatabaseNotControlledError(str(exc)), tb) File "/shelter/rppa/galaxy/eggs/sqlalchemy_migrate-0.9.6-py2.7.egg/migrate/versioning/schema.py", line 50, in load data = list(result)[0]migrate.exceptions.DatabaseNotControlledError: list index out of range-bash-4.2$