Urgent: GCC - GTN presentations and workshop
Hi GTN! Today is the deadline to hand-in workshop proposals. Sorry for the late notice. We were thinking of handing in a session about: * GTN github repo + template * Galaxy tours * Best-practices * Some kind of train the trainer * Galaxy-Hub ? A mixture or only parts of it, not sure. Do you think we should do this? Other ideas? What about a Galaxy GTN talk? Please let me know what you think, Bjoern
Hello Bjoern, A training session on Galaxy Tours will be great. We have started using it to demonstrate the use of dataset collection for proteomics and short proteogenomics workflows. It is a lot of work - but results are worth it. Regards, Pratik Pratik Jagtap, Research Assistant Professor, Department of Biochemistry, Molecular Biology and Biophysics, University of Minnesota. *Address: 7-166 MCB, 420 Washington Ave SE, Minneapolis, MN 55455* *Phone: 612-624-0381 <http://612-624-0381/> Email: pjagtap@umn.edu <pjagtap@umn.edu> * *Using Galaxy for Proteomics* <http://z.umn.edu/galaxypchapter> On Fri, Jan 20, 2017 at 9:38 AM, Björn Grüning <bjoern.gruening@gmail.com> wrote:
Hi GTN!
Today is the deadline to hand-in workshop proposals. Sorry for the late notice. We were thinking of handing in a session about:
* GTN github repo + template * Galaxy tours * Best-practices * Some kind of train the trainer * Galaxy-Hub ?
A mixture or only parts of it, not sure. Do you think we should do this? Other ideas?
What about a Galaxy GTN talk?
Please let me know what you think, Bjoern ___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: https://lists.galaxyproject.org/
To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/
Hi Bjoern, If it's not too late to add an opinion - I agree with Pratik that a session on Galaxy Tours would be great and if possible I think it would also be great to include something on the GTN github, so that people could learn a bit about the training material that's available and how they can contribute if they want. Maybe then any relevant best practices for how to use and/or contribute to the training material could be included in that? And in my opinion it could be considered a form of Train-the-Trainer as it would help trainers learn about material that they can use in their trainings. I also think a GTN talk would be good to include if there's a slot, as it would probably be good to give people an update on where things are at and future plans. And I think GCC2017 could be an excellent time to get feedback/input from people in the room on what they think e.g if there are things they think should be changed, improved, what new topics could be added, or what the prioritites should be. If you and others agree maybe that could happen at the workshop, after the talk or during a birds-of-a-feather. Cheers! Maria Maria Doyle Application and Training Specialist Research Computing Facility [http://i.imgur.com/tG0nMXg.jpg] 305 Grattan Street Melbourne, Victoria 3000 Australia From: Galaxy-training <galaxy-training-bounces@lists.galaxyproject.org<mailto:galaxy-training-bounces@lists.galaxyproject.org>> on behalf of Pratik Jagtap <pjagtap@umn.edu<mailto:pjagtap@umn.edu>> Date: Saturday, 21 January 2017 at 3:20 AM To: Björn Grüning <bjoern.gruening@gmail.com<mailto:bjoern.gruening@gmail.com>> Cc: Galaxy-Training List <galaxy-training@lists.galaxyproject.org<mailto:galaxy-training@lists.galaxyproject.org>>, Dannon Baker <dannon.baker@gmail.com<mailto:dannon.baker@gmail.com>> Subject: [SPAM][M] Re: [gxy-train] Urgent: GCC - GTN presentations and workshop Hello Bjoern, A training session on Galaxy Tours will be great. We have started using it to demonstrate the use of dataset collection for proteomics and short proteogenomics workflows. It is a lot of work - but results are worth it. Regards, Pratik Pratik Jagtap, Research Assistant Professor, Department of Biochemistry, Molecular Biology and Biophysics, University of Minnesota. Address: 7-166 MCB, 420 Washington Ave SE, Minneapolis, MN 55455 Phone: 612-624-0381<http://612-624-0381/> Email: pjagtap@umn.edu<mailto:pjagtap@umn.edu> Using Galaxy for Proteomics<http://z.umn.edu/galaxypchapter> On Fri, Jan 20, 2017 at 9:38 AM, Björn Grüning <bjoern.gruening@gmail.com<mailto:bjoern.gruening@gmail.com>> wrote: Hi GTN! Today is the deadline to hand-in workshop proposals. Sorry for the late notice. We were thinking of handing in a session about: * GTN github repo + template * Galaxy tours * Best-practices * Some kind of train the trainer * Galaxy-Hub ? A mixture or only parts of it, not sure. Do you think we should do this? Other ideas? What about a Galaxy GTN talk? Please let me know what you think, Bjoern ___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: https://lists.galaxyproject.org/ To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/ This email (including any attachments or links) may contain confidential and/or legally privileged information and is intended only to be read or used by the addressee. If you are not the intended addressee, any use, distribution, disclosure or copying of this email is strictly prohibited. Confidentiality and legal privilege attached to this email (including any attachments) are not waived or lost by reason of its mistaken delivery to you. If you have received this email in error, please delete it and notify us immediately by telephone or email. Peter MacCallum Cancer Centre provides no guarantee that this transmission is free of virus or that it has not been intercepted or altered and will not be liable for any delay in its receipt.
Hi Maria, I handed some poorly written proposal in. Let's hope the best! I also think the network should apply for a talk, any volunteer? :) Thanks for you kind words, Bjoern Am 24.01.2017 um 00:34 schrieb Doyle Maria:
Hi Bjoern,
If it's not too late to add an opinion - I agree with Pratik that a session on Galaxy Tours would be great and if possible I think it would also be great to include something on the GTN github, so that people could learn a bit about the training material that's available and how they can contribute if they want. Maybe then any relevant best practices for how to use and/or contribute to the training material could be included in that? And in my opinion it could be considered a form of Train-the-Trainer as it would help trainers learn about material that they can use in their trainings.
I also think a GTN talk would be good to include if there's a slot, as it would probably be good to give people an update on where things are at and future plans. And I think GCC2017 could be an excellent time to get feedback/input from people in the room on what they think e.g if there are things they think should be changed, improved, what new topics could be added, or what the prioritites should be. If you and others agree maybe that could happen at the workshop, after the talk or during a birds-of-a-feather.
Cheers!
Maria
Maria Doyle Application and Training Specialist Research Computing Facility
[http://i.imgur.com/tG0nMXg.jpg]
305 Grattan Street Melbourne, Victoria 3000 Australia
From: Galaxy-training <galaxy-training-bounces@lists.galaxyproject.org<mailto:galaxy-training-bounces@lists.galaxyproject.org>> on behalf of Pratik Jagtap <pjagtap@umn.edu<mailto:pjagtap@umn.edu>> Date: Saturday, 21 January 2017 at 3:20 AM To: Björn Grüning <bjoern.gruening@gmail.com<mailto:bjoern.gruening@gmail.com>> Cc: Galaxy-Training List <galaxy-training@lists.galaxyproject.org<mailto:galaxy-training@lists.galaxyproject.org>>, Dannon Baker <dannon.baker@gmail.com<mailto:dannon.baker@gmail.com>> Subject: [SPAM][M] Re: [gxy-train] Urgent: GCC - GTN presentations and workshop
Hello Bjoern,
A training session on Galaxy Tours will be great. We have started using it to demonstrate the use of dataset collection for proteomics and short proteogenomics workflows. It is a lot of work - but results are worth it.
Regards, Pratik
Pratik Jagtap,
Research Assistant Professor, Department of Biochemistry, Molecular Biology and Biophysics, University of Minnesota.
Address: 7-166 MCB, 420 Washington Ave SE, Minneapolis, MN 55455
Phone: 612-624-0381<http://612-624-0381/> Email: pjagtap@umn.edu<mailto:pjagtap@umn.edu>
Using Galaxy for Proteomics<http://z.umn.edu/galaxypchapter>
On Fri, Jan 20, 2017 at 9:38 AM, Björn Grüning <bjoern.gruening@gmail.com<mailto:bjoern.gruening@gmail.com>> wrote: Hi GTN!
Today is the deadline to hand-in workshop proposals. Sorry for the late notice. We were thinking of handing in a session about:
* GTN github repo + template * Galaxy tours * Best-practices * Some kind of train the trainer * Galaxy-Hub ?
A mixture or only parts of it, not sure. Do you think we should do this? Other ideas?
What about a Galaxy GTN talk?
Please let me know what you think, Bjoern ___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: https://lists.galaxyproject.org/
To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/
This email (including any attachments or links) may contain confidential and/or legally privileged information and is intended only to be read or used by the addressee. If you are not the intended addressee, any use, distribution, disclosure or copying of this email is strictly prohibited. Confidentiality and legal privilege attached to this email (including any attachments) are not waived or lost by reason of its mistaken delivery to you. If you have received this email in error, please delete it and notify us immediately by telephone or email. Peter MacCallum Cancer Centre provides no guarantee that this transmission is free of virus or that it has not been intercepted or altered and will not be liable for any delay in its receipt.
Hi Bjoern, That¹s great! I¹m not sure if I can get to GCC2017 yet but if I can I¹ll be happy to volunteer. Cheers, Maria Maria Doyle Application and Training Specialist Research Computing Facility 305 Grattan Street Melbourne, Victoria 3000 Australia On 25/01/2017, 10:03 AM, "Björn Grüning" <bjoern.gruening@gmail.com> wrote:
Hi Maria,
I handed some poorly written proposal in. Let's hope the best!
I also think the network should apply for a talk, any volunteer? :)
Thanks for you kind words, Bjoern
Am 24.01.2017 um 00:34 schrieb Doyle Maria:
Hi Bjoern,
If it's not too late to add an opinion - I agree with Pratik that a session on Galaxy Tours would be great and if possible I think it would also be great to include something on the GTN github, so that people could learn a bit about the training material that's available and how they can contribute if they want. Maybe then any relevant best practices for how to use and/or contribute to the training material could be included in that? And in my opinion it could be considered a form of Train-the-Trainer as it would help trainers learn about material that they can use in their trainings.
I also think a GTN talk would be good to include if there's a slot, as it would probably be good to give people an update on where things are at and future plans. And I think GCC2017 could be an excellent time to get feedback/input from people in the room on what they think e.g if there are things they think should be changed, improved, what new topics could be added, or what the prioritites should be. If you and others agree maybe that could happen at the workshop, after the talk or during a birds-of-a-feather.
Cheers!
Maria
Maria Doyle Application and Training Specialist Research Computing Facility
[http://i.imgur.com/tG0nMXg.jpg]
305 Grattan Street Melbourne, Victoria 3000 Australia
From: Galaxy-training
<galaxy-training-bounces@lists.galaxyproject.org<mailto:galaxy-training-b ounces@lists.galaxyproject.org>> on behalf of Pratik Jagtap <pjagtap@umn.edu<mailto:pjagtap@umn.edu>> Date: Saturday, 21 January 2017 at 3:20 AM To: Björn Grüning <bjoern.gruening@gmail.com<mailto:bjoern.gruening@gmail.com>> Cc: Galaxy-Training List
<galaxy-training@lists.galaxyproject.org<mailto:galaxy-training@lists.gal axyproject.org>>, Dannon Baker <dannon.baker@gmail.com<mailto:dannon.baker@gmail.com>> Subject: [SPAM][M] Re: [gxy-train] Urgent: GCC - GTN presentations and workshop
Hello Bjoern,
A training session on Galaxy Tours will be great. We have started using it to demonstrate the use of dataset collection for proteomics and short proteogenomics workflows. It is a lot of work - but results are worth it.
Regards, Pratik
Pratik Jagtap,
Research Assistant Professor, Department of Biochemistry, Molecular Biology and Biophysics, University of Minnesota.
Address: 7-166 MCB, 420 Washington Ave SE, Minneapolis, MN 55455
Phone: 612-624-0381<http://612-624-0381/> Email: pjagtap@umn.edu<mailto:pjagtap@umn.edu>
Using Galaxy for Proteomics<http://z.umn.edu/galaxypchapter>
On Fri, Jan 20, 2017 at 9:38 AM, Björn Grüning <bjoern.gruening@gmail.com<mailto:bjoern.gruening@gmail.com>> wrote: Hi GTN!
Today is the deadline to hand-in workshop proposals. Sorry for the late notice. We were thinking of handing in a session about:
* GTN github repo + template * Galaxy tours * Best-practices * Some kind of train the trainer * Galaxy-Hub ?
A mixture or only parts of it, not sure. Do you think we should do this? Other ideas?
What about a Galaxy GTN talk?
Please let me know what you think, Bjoern ___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: https://lists.galaxyproject.org/
To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/
This email (including any attachments or links) may contain confidential and/or legally privileged information and is intended only to be read or used by the addressee. If you are not the intended addressee, any use, distribution, disclosure or copying of this email is strictly prohibited. Confidentiality and legal privilege attached to this email (including any attachments) are not waived or lost by reason of its mistaken delivery to you. If you have received this email in error, please delete it and notify us immediately by telephone or email. Peter MacCallum Cancer Centre provides no guarantee that this transmission is free of virus or that it has not been intercepted or altered and will not be liable for any delay in its receipt.
This email (including any attachments or links) may contain confidential and/or legally privileged information and is intended only to be read or used by the addressee. If you are not the intended addressee, any use, distribution, disclosure or copying of this email is strictly prohibited. Confidentiality and legal privilege attached to this email (including any attachments) are not waived or lost by reason of its mistaken delivery to you. If you have received this email in error, please delete it and notify us immediately by telephone or email. Peter MacCallum Cancer Centre provides no guarantee that this transmission is free of virus or that it has not been intercepted or altered and will not be liable for any delay in its receipt.
participants (3)
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Björn Grüning
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Doyle Maria
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Pratik Jagtap