Hi,
How can I get the gene names for the whole exome locations ( hg18)..
********************
chr1 58932 59892
chr1 357510 358470
chr1 610947 611907
chr1 851160 851280
chr1 855395 855608
chr1 856246 856366
chr1 860956 861196
********************
I used the
"Profile Annotations for a set of genomic intervals".. But I am not getting proper output...
I just want the at least gene name in the fourth column for each location..like this
**************************
chr1 58932 59892 OR4F5:ccds|CCDS30547.1
chr1 357510 358470 OR4F16:ccds|CCDS41220.1
chr1 610947 611907 OR4F16:ccds|CCDS41221.1
chr1 851160 851280 SAMD11:ccds|CCDS2.2
chr1 855395 855608 SAMD11:ccds|CCDS2.2
chr1 856246 856366 SAMD11:ccds|CCDS2.2
chr1 860956 861196 SAMD11:ccds|CCDS2.2
******************
Can you help me to get this information from galaxy?
Thanks,
Shibu
On Thu, May 20, 2010 at 2:52 PM, Anton Nekrutenko
<anton@bx.psu.edu> wrote:
Shibu:
We experienced disk problems overnight. Galaxy is back to normal.
Tx,
anton
galaxy team