I am also getting the same error with my local biomart and local galaxy installations.

Thanks,
Liisa
 


From: Jennifer Jackson <jen@bx.psu.edu>
To: Christophe Klopp <Christophe.Klopp@toulouse.inra.fr>
Cc: galaxy-user@lists.bx.psu.edu
Date: 2011-05-31 09:32
Subject: Re: [galaxy-user] biomart error
Sent by: galaxy-user-bounces@lists.bx.psu.edu





Hello Christophe,

I am unable to duplicate - BioMart appears to be functioning as expected
this morning. Would you have time to run your query again?

If the problem persists, if you could share your history with me
(Options -> Share or Publish -> email back link) and list out the exact
steps that you are performing, that would be very helpful.

Best,

Jen
Galaxy team

On 5/30/11 8:33 AM, Christophe Klopp wrote:
> Hi,
>
> I've tried a simple query in biomart : retrieve all gene locations for
> the Danio rerio in Ensembl 62 and I get an error :
> An error occurred running this job: /failure preparing job
> /
> The same happens with the test site?
>
> Cheers
>
> Christophe/
> /
>
> --
> ====================================================================
> = Christophe KLOPP BIA    INRA Toulouse 31326 Castanet-Tolosan     =
> = Tel: 33 5 61 28 50 36   Email:christophe.klopp@toulouse.inra.fr  =
> =http://www.sigenae.org/                                           =
> =http://bioinfo.genotoul.fr/                                       =
> ====================================================================
>
>
>
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--
Jennifer Jackson
http://usegalaxy.org
http://galaxyproject.org
___________________________________________________________
The Galaxy User list should be used for the discussion of
Galaxy analysis and other features on the public server
at usegalaxy.org.  Please keep all replies on the list by
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