Hi Jeremy, Thanks for the help! I can upload fasta data for custom builds (name:'NCI-H209-hg18'; key:'NCI-H209-V1') now. but when I try to use a bed file specific for this custom builds to fetch sequences from this custom genome, it gives error information that no sequences are available for 'NCI-H209-v1'. I might do something wrong, do you know what would be the reason? Thanks! Pengfei On Fri, Feb 17, 2012 at 7:40 AM, Jeremy Goecks <jeremy.goecks@emory.edu>wrote:
Hi Pengfei and Noa,
I suspect this was a temporary problem related to software issues that we encountered yesterday. Please try again and let us know if you're still having problems.
Also, note that either a FASTA dataset or a Len file is needed, but not both. Using a FASTA dataset enables viewing genome data in Trackster.
Best, J.
On Feb 17, 2012, at 12:00 AM, Noa Sher wrote:
I also had exactly the same problem yesterday - glad to see that maybe it wasn't just me. Happy for help! Noa
On 16/02/2012 22:24, Pengfei Yu wrote:
Dear sir or madam,
I am using galaxy public server and I am trying to build a custom genome using the function "custom Builds" in "user" section. I specified the Name, Key and uploaded the genome fasta file also the chromosome length file. But when I click "submit", galaxy gave an error information like that: "" *Server Error:* An error occurred. See the error logs for more information. (Turn debug on to display exception reports here) "" I don't know where to find the error logs and how to turn debug on. Could you tell me how to fix the problem and upload the custom builds? Thanks a lot!
Pengfei -- Pengfei Yu Center of Biophysics and Computational Biology University of Illinois Urbana-Champaign Illinois, 61820, US Cell phone: 217-898-6301
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-- Pengfei Yu Center of Biophysics and Computational Biology University of Illinois Urbana-Champaign Illinois, 61820, US Cell phone: 217-898-6301