Hi everybody.

 

I´m trying to analyze Chip-SEq Data from Ion-Torrent using Peak Calling/MACS. I have some questions:

 

·         How do I establish the Tag size? The median of size reads in my data are 156pb, the max 306?

·         Bandwidht: is the sonication size?

 

Thanks in advance

 

Regards

 

If you have used the Services of the Genomics Unit of Cabimer, we would be grateful if you would give us a mention in future publications

Mónica Pérez Alegre, PhD

Genomics Unit

CABIMER-CSIC

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41092 Seville-SPAIN

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www.cabimer.es

http://www.cabimer.es/web/es/unidades-apoyo/genomica