On Mar 9, 2010, at 1:49 PM, Stein, Olaf wrote:
I will try and be a little more specific.
I have a tool, it runs and produces the output files it would produce on the shell.
Here is the history:
-------------------------------------------------------
Info: $Id: PedCount.pl 2408 2009-11-13 17:29:39Z whv001 $
-post flag seen
-count flag seen
-write seen, using "/export/home/galaxy/galaxy-dist/database/files/000/dataset_25.dat" prefix
Marker set 1
Bucketizing reduces evaluation count from 1140 to 470, or by 58
------------------------------------------------------
I can see the files on disk in :
/export/home/galaxy/galaxy-dist/database/files/000/
How can I view them from within galaxy, and download them
Thanks
Olaf
-------------------------
Olaf Stein
DBA
Battelle Center for Mathematical Medicine
Nationwide Children's Hospital, The Research Institute
700 Children's Drive
43205 Columbus, OH
phone: 1-614-355-5685
cell: 1-614-843-0432
email: olaf.stein@nationwidechildrens.org
“I consider that the golden rule requires that if I like a program I must share it with other people who like it.”
Richard M. Stallman
------ Forwarded Message
From: Olaf Stein <olaf.stein@nationwidechildrens.org>
Date: Tue, 09 Mar 2010 11:59:33 -0500
To: "galaxy-user@lists.bx.psu.edu" <galaxy-user@lists.bx.psu.edu>
Conversation: Output files
Subject: Output files
Hi all,
I have a tool setup (a small perl script) and it runs fine, I get the output I would usually see in shell in the history.
The script also generates some output files (at least in a normal run in the shell), where within galaxy can I see those?
Thanks
Olaf
-------------------------
Olaf Stein
DBA
Battelle Center for Mathematical Medicine
Nationwide Children's Hospital, The Research Institute
700 Children's Drive
43205 Columbus, OH
phone: 1-614-355-5685
cell: 1-614-843-0432
email: olaf.stein@nationwidechildrens.org
“I consider that the golden rule requires that if I like a program I must share it with other people who like it.”
Richard M. Stallman
------ End of Forwarded Message
_______________________________________________
galaxy-user mailing list
galaxy-user@lists.bx.psu.edu
http://lists.bx.psu.edu/listinfo/galaxy-user