1 Dec
2010
1 Dec
'10
6:53 p.m.
Excerpts from Sridhar A Malkaram's message of Wed Dec 01 23:30:29 +0000 2010:
When loading pasted text with lines in bed format (chrom, start, end), I find that galaxy can't display it in the visualization.
Does the visualization need specific bed format , with all the columns (~13)? Are gff format/Sam format files supported?
What behavior are you seeing? An error or just nothing displayed? Galaxy should support 3 column bed, as well as GFF for viz. SAM must be converted to BAM for display right now.