[galaxy-user] Which "Library Type" should I use for single-end reads

15 Apr 2013

      Hi All,

I have a very basic question about parameters for running TopHat.

I have datasets of single-end reads. These datasets were generated with Illumina Genome Analyzer IIx. Which "Library Type" should I choose to run Tophat?

Thanks.

Best,

Jianguang

[galaxy-user] Which "Library Type" should I use for single-end reads

Du, Jianguang