Alexandre: I made a little movie for you that can be accessible here: http://screencast.g2.bx.psu.edu/galaxy/BioMart2Galaxy/ There are also other movies (no Festival de Cannes award yet :( ) at this URL: http://galaxy.psu.edu/screencasts.html Let me know if you have any trouble. Thanks, anton galaxy team On Jul 25, 2008, at 3:28 AM, Alexandre Gattiker wrote:
Hello,
I would like to import features from BioMart into galaxy. However the 'embedded' BioMart view yields an HTML table. How do I convert that to GFF or BED?
Best regards
-- -------------------------------------------------------- Alexandre Gattiker Bioinformatics & Biostatistics Core Facility EPFL School of Life Sciences / Faculté des Sciences de la vie FSV http://people.epfl.ch/Alexandre.Gattiker
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Anton Nekrutenko Asst. Professor Department of Biochemistry and Molecular Biology Center for Comparative Genomics and Bioinformatics Penn State University anton@bx.psu.edu http://nekrut.bx.psu.edu 814.865.4752